Publications by authors named "Szymon Grabowski"

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The whole is greater than the sum of its parts: binary and ternary 5-fluorouracil co-crystals with enhanced selectivity towards metastatic cancer cells.
Szymon Grabowski, Julianna Wojdyła-Parat, Małgorzata Tyszka-Czochara, Marcin Kozieł, Michał Chmylak

Chem Commun (Camb)· October 2025

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Additive-driven microwave crystallization of tyramine polymorphs and salts: a quantum crystallography perspective.
Szymon Grabowski, Klaudia Nowakowska, Helena Butkiewicz, Anna Hoser, Aleksandra Wesełucha-Birczyńska

IUCrJ· May 2025

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PgRC2: engineering the compression of sequencing reads.
Tomasz M Kowalski, Szymon Grabowski

Bioinformatics· March 2025

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copMEM2: robust and scalable maximum exact match finding.
Szymon Grabowski, Wojciech Bieniecki

Bioinformatics· May 2023

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The Cooperative Anti-Neoplastic Activity of Polyphenolic Phytochemicals on Human T-Cell Acute Lymphoblastic Leukemia Cell Line MOLT-4 In Vitro.
Patrycja Koszałka, Grzegorz Stasiłojć, Natalia Miękus-Purwin, Maciej Niedźwiecki, Maciej Purwin, Szymon Grabowski

Int J Mol Sci· April 2022

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MBGC: Multiple Bacteria Genome Compressor.
Szymon Grabowski, Tomasz M Kowalski

Gigascience· January 2022

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PgRC: pseudogenome-based read compressor.
Tomasz M Kowalski, Szymon Grabowski

Bioinformatics· April 2020

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Whisper: read sorting allows robust mapping of DNA sequencing data.
Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Adam Gudyś, Szymon Grabowski

Bioinformatics· June 2019

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copMEM: finding maximal exact matches via sampling both genomes.
Szymon Grabowski, Wojciech Bieniecki

Bioinformatics· February 2019

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SOPanG: online text searching over a pan-genome.
Aleksander Cislak, Szymon Grabowski, Jan Holub

Bioinformatics· December 2018

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Correction: Indexes of Large Genome Collections on a PC.
Agnieszka Danek, Sebastian Deorowicz, Szymon Grabowski

PLoS One· May 2016

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Indexing Arbitrary-Length k-Mers in Sequencing Reads.
Tomasz Kowalski, Szymon Grabowski, Sebastian Deorowicz

PLoS One· April 2016

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Comment on: 'ERGC: an efficient referential genome compression algorithm'.
Sebastian Deorowicz, Szymon Grabowski, Idoia Ochoa, Mikel Hernaez, Tsachy Weissman

Bioinformatics· April 2016

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Indexes of large genome collections on a PC.
Agnieszka Danek, Sebastian Deorowicz, Szymon Grabowski

PLoS One· June 2015

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Disk-based compression of data from genome sequencing.
Szymon Grabowski, Sebastian Deorowicz, Łukasz Roguski

Bioinformatics· May 2015

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KMC 2: fast and resource-frugal k-mer counting.
Sebastian Deorowicz, Marek Kokot, Szymon Grabowski, Agnieszka Debudaj-Grabysz

Bioinformatics· May 2015

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Data compression for sequencing data.
Sebastian Deorowicz, Szymon Grabowski

Algorithms Mol Biol· November 2013

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Genome compression: a novel approach for large collections.
Sebastian Deorowicz, Agnieszka Danek, Szymon Grabowski

Bioinformatics· October 2013

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Fast matching of transcription factor motifs using generalized position weight matrix models.
Emanuele Giaquinta, Szymon Grabowski, Esko Ukkonen

J Comput Biol· September 2013

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Disk-based k-mer counting on a PC.
Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Szymon Grabowski

BMC Bioinformatics· May 2013

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Robust relative compression of genomes with random access.
Sebastian Deorowicz, Szymon Grabowski

Bioinformatics· November 2011

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Compression of DNA sequence reads in FASTQ format.
Sebastian Deorowicz, Szymon Grabowski

Bioinformatics· March 2011

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