Publications by authors named "Thomas A Cebula"

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Future perspectives, applications and challenges of genomic epidemiology studies for food-borne pathogens: A case study of Enterohemorrhagic Escherichia coli (EHEC) of the O157:H7 serotype.
Mark Eppinger, Thomas A Cebula

Gut Microbes· February 2016

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Hybrid Vibrio cholerae El Tor lacking SXT identified as the cause of a cholera outbreak in the Philippines.
David C Klinzing, Seon Young Choi, Nur A Hasan, Ronald R Matias, Enrique Tayag, Thomas A Cebula

mBio· April 2015

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Concordance and discordance of sequence survey methods for molecular epidemiology.
Eduardo Castro-Nallar, Nur A Hasan, Thomas A Cebula, Rita R Colwell, Richard A Robison

PeerJ· March 2015

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Microbial community profiling of human saliva using shotgun metagenomic sequencing.
Nur A Hasan, Brian A Young, Angela T Minard-Smith, Kelly Saeed, Huai Li, Thomas A Cebula

PLoS One· February 2015

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Genomic and phenotypic characterization of Vibrio cholerae non-O1 isolates from a US Gulf Coast cholera outbreak.
Bradd J Haley, Seon Young Choi, Christopher J Grim, Tiffiani J Onifade, Hediye N Cinar, Thomas A Cebula

PLoS One· January 2015

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Genome Sequence of Escherichia coli O157:H7 Strain 2886-75, Associated with the First Reported Case of Human Infection in the United States.
Fatemeh Sanjar, Tracy H Hazen, Sadiq M Shah, Sara S K Koenig, Sonia Agrawal, Thomas A Cebula

Genome Announc· January 2014

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Genome Sequences of Clinical Vibrio cholerae Isolates from an Oyster-Borne Cholera Outbreak in Florida.
Bradd J Haley, Seon Young Choi, Nur A Hasan, Abdul Shakur H Abdullah, Thomas A Cebula

Genome Announc· November 2013

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Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains.
Mark Eppinger, Sean Daugherty, Sonia Agrawal, Kevin Galens, Naomi Sengamalay, Thomas A Cebula

Genome Announc· February 2013

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Exploring genotypic and phenotypic diversity of microbes using microarray approaches.
Amit Mukherjee, Scott A Jackson, J Eugene Leclerc, Thomas A Cebula

Toxicol Mech Methods· October 2012

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Genomic diversity of 2010 Haitian cholera outbreak strains.
Nur A Hasan, Seon Young Choi, Mark Eppinger, Philip W Clark, Arlene Chen, Thomas A Cebula

Proc Natl Acad Sci U S A· July 2012

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Genomic anatomy of Escherichia coli O157:H7 outbreaks.
Mark Eppinger, Mark K Mammel, Joseph E Leclerc, Jacques Ravel, Thomas A Cebula

Proc Natl Acad Sci U S A· December 2011

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Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution.
W Florian Fricke, Mark K Mammel, Patrick F McDermott, Carmen Tartera, David G White, Thomas A Cebula

J Bacteriol· July 2011

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Investigating the global genomic diversity of Escherichia coli using a multi-genome DNA microarray platform with novel gene prediction strategies.
Scott A Jackson, Isha R Patel, Tammy Barnaba, Joseph E LeClerc, Thomas A Cebula

BMC Genomics· July 2011

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Genome signatures of Escherichia coli O157:H7 isolates from the bovine host reservoir.
Mark Eppinger, Mark K Mammel, Joseph E Leclerc, Jacques Ravel, Thomas A Cebula

Appl Environ Microbiol· May 2011

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Genomic characterization of asymptomatic Escherichia coli isolated from the neobladder.
Jason W Sahl, Amanda L Lloyd, Julia C Redman, Thomas A Cebula, David P Wood

Microbiology (Reading)· April 2011

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Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry.
W Florian Fricke, Patrick F McDermott, Mark K Mammel, Shaohua Zhao, Timothy J Johnson, Thomas A Cebula

Appl Environ Microbiol· September 2009

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Comparative genomics of the IncA/C multidrug resistance plasmid family.
W Florian Fricke, Timothy J Welch, Patrick F McDermott, Mark K Mammel, J Eugene LeClerc, Thomas A Cebula

J Bacteriol· August 2009

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A microarray based approach for the identification of common foodborne viruses.
Mobolanle Ayodeji, Michael Kulka, Scott A Jackson, Isha Patel, Mark Mammel, Thomas A Cebula

Open Virol J· March 2009

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Optical mapping and 454 sequencing of Escherichia coli O157 : H7 isolates linked to the US 2006 spinach-associated outbreak.
Michael L Kotewicz, Mark K Mammel, J Eugene LeClerc, Thomas A Cebula

Microbiology (Reading)· November 2008

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Altered utilization of N-acetyl-D-galactosamine by Escherichia coli O157:H7 from the 2006 spinach outbreak.
Amit Mukherjee, Mark K Mammel, J Eugene LeClerc, Thomas A Cebula

J Bacteriol· March 2008

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Optical maps distinguish individual strains of Escherichia coli O157 : H7.
Michael L Kotewicz, Scott A Jackson, J Eugene LeClerc, Thomas A Cebula

Microbiology (Reading)· June 2007

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Interrogating genomic diversity of E. coli O157:H7 using DNA tiling arrays.
Scott A Jackson, Mark K Mammel, Isha R Patel, Tammy Mays, Thomas J Albert, Thomas A Cebula

Forensic Sci Int· May 2007

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Multiple antimicrobial resistance in plague: an emerging public health risk.
Timothy J Welch, W Florian Fricke, Patrick F McDermott, David G White, Marie-Laure Rosso, Thomas A Cebula

PLoS One· March 2007

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Quality sample collection, handling, and preservation for an effective microbial forensics program.
Bruce Budowle, Steven E Schutzer, James P Burans, Douglas J Beecher, Thomas A Cebula

Appl Environ Microbiol· October 2006

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The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements.

Nat Biotechnol· September 2006

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