Publications by authors named "Thomas Blomquist"

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Aerosolized Harmful Algal Bloom Toxin Microcystin-LR Induces Type 1/Type 17 Inflammation of Murine Airways.
Joshua D Breidenbach, Benjamin W French, Lauren M Stanoszek, John-Paul Lavik, Krishna Rao Maddipati, Thomas M Blomquist

Toxins (Basel)· November 2024

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Epigenetic and pharmacological control of pigmentation via Bromodomain Protein 9 (BRD9).
Tupa Basuroy, Megan Dreier, Caitlin Baum, Thomas Blomquist, Robert Trumbly

Pigment Cell Melanoma Res· January 2023

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Antioxidant Therapy Significantly Attenuates Hepatotoxicity following Low Dose Exposure to Microcystin-LR in a Murine Model of Diet-Induced Non-Alcoholic Fatty Liver Disease.
Apurva Lad, Jonathan Hunyadi, Jacob Connolly, Joshua D Breidenbach, Fatimah K Khalaf, Thomas M Blomquist

Antioxidants (Basel)· August 2022

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Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples.
Yifan Zhang, Thomas M Blomquist, Rebecca Kusko, Daniel Stetson, Zhihong Zhang

Genome Biol· June 2022

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Advancing NGS quality control to enable measurement of actionable mutations in circulating tumor DNA.
James C Willey, Tom B Morrison, Bradley Austermiller, Erin L Crawford, Daniel J Craig, Thomas M Blomquist

Cell Rep Methods· November 2021

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Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing.
Wenming Xiao, Luyao Ren, Zhong Chen, Li Tai Fang, Yongmei Zhao, Thomas M Blomquist

Nat Biotechnol· September 2021

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Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions.
Binsheng Gong, Dan Li, Rebecca Kusko, Natalia Novoradovskaya, Yifan Zhang, Thomas M Blomquist

Genome Biol· April 2021

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Whole-Genome Sequencing of Bacterial Isolates That Degrade the Cyanobacterial Toxin Microcystin-LR.
Alexander T McCartney, Ji-Youn Yeo, Thomas M Blomquist, Jason F Huntley

Microbiol Resour Announc· October 2020

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CD40 Receptor Knockout Protects against Microcystin-LR (MC-LR) Prolongation and Exacerbation of Dextran Sulfate Sodium (DSS)-Induced Colitis.
Robin C Su, Emily A Warner, Joshua D Breidenbach, Apurva Lad, Thomas M Blomquist

Biomedicines· June 2020

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Hyperglycemia induces key genetic and phenotypic changes in human liver epithelial HepG2 cells which parallel the Leprdb/J mouse model of non-alcoholic fatty liver disease (NAFLD).
Robin C Su, Apurva Lad, Joshua D Breidenbach, Thomas M Blomquist, William T Gunning

PLoS One· April 2020

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Bromodomain and extra-terminal domain (BET) proteins regulate melanocyte differentiation.
Archit Trivedi, Aanchal Mehrotra, Caitlin E Baum, Brandon Lewis, Tupa Basuroy, Thomas Blomquist

Epigenetics Chromatin· March 2020

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Technical advance in targeted NGS analysis enables identification of lung cancer risk-associated low frequency TP53, PIK3CA, and BRAF mutations in airway epithelial cells.
Daniel J Craig, Thomas Morrison, Sadik A Khuder, Erin L Crawford, Leihong Wu, Thomas M Blomquist

BMC Cancer· November 2019

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RNA sequencing in human HepG2 hepatocytes reveals PPAR-α mediates transcriptome responsiveness of bilirubin.
Darren M Gordon, Thomas M Blomquist, Scott A Miruzzi, Robert McCullumsmith, David E Stec

Physiol Genomics· June 2019

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Exposure to the Harmful Algal Bloom (HAB) Toxin Microcystin-LR (MC-LR) Prolongs and Increases Severity of Dextran Sulfate Sodium (DSS)-Induced Colitis.
Robin C Su, Thomas M Blomquist, Andrew L Kleinhenz, Fatimah K Khalaf, Prabhatchandra Dube

Toxins (Basel)· June 2019

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RNAseq analysis of bronchial epithelial cells to identify COPD-associated genes and SNPs.
Jiyoun Yeo, Diego A Morales, Tian Chen, Erin L Crawford, Xiaolu Zhang, Thomas M Blomquist

BMC Pulm Med· March 2018

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A lung cancer risk classifier comprising genome maintenance genes measured in normal bronchial epithelial cells.
Jiyoun Yeo, Erin L Crawford, Xiaolu Zhang, Sadik Khuder, Tian Chen, Thomas M Blomquist

BMC Cancer· May 2017

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Postural orthostatic tachycardia syndrome is associated with platelet storage pool deficiency.
William T Gunning, Beverly L Karabin, Thomas M Blomquist, Blair P Grubb

Medicine (Baltimore)· September 2016

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Haplotype and diplotype analyses of variation in ERCC5 transcription cis-regulation in normal bronchial epithelial cells.
Xiaolu Zhang, Erin L Crawford, Thomas M Blomquist, Sadik A Khuder, Jiyoun Yeo

Physiol Genomics· July 2016

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Control for stochastic sampling variation and qualitative sequencing error in next generation sequencing.
Thomas Blomquist, Erin L Crawford, Jiyoun Yeo, Xiaolu Zhang, James C Willey

Biomol Detect Quantif· September 2015

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A multiplex two-color real-time PCR method for quality-controlled molecular diagnostic testing of FFPE samples.
Jiyoun Yeo, Erin L Crawford, Thomas M Blomquist, Lauren M Stanoszek, Rachel E Dannemiller

PLoS One· January 2015

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Targeted RNA-sequencing with competitive multiplex-PCR amplicon libraries.
Thomas M Blomquist, Erin L Crawford, Jennie L Lovett, Jiyoun Yeo, Lauren M Stanoszek

PLoS One· September 2014

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CEBPG Exhibits Allele-Specific Expression in Human Bronchial Epithelial Cells.
Thomas M Blomquist, Ronald D Brown, Erin L Crawford, Ivana de la Serna, Kandace Williams

Gene Regul Syst Bio· July 2013

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Quality control methods for optimal BCR-ABL1 clinical testing in human whole blood samples.
Lauren M Stanoszek, Erin L Crawford, Thomas M Blomquist, Jessica A Warns, Paige F S Willey

J Mol Diagn· May 2013

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Cis-acting genetic variation at an E2F1/YY1 response site and putative p53 site is associated with altered allele-specific expression of ERCC5 (XPG) transcript in normal human bronchial epithelium.
Thomas M Blomquist, Erin L Crawford, James C Willey

Carcinogenesis· July 2010

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Pattern of antioxidant and DNA repair gene expression in normal airway epithelium associated with lung cancer diagnosis.
Thomas Blomquist, Erin L Crawford, D'Anna Mullins, Youngsook Yoon, Dawn-Alita Hernandez

Cancer Res· November 2009

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