Publications by authors named "Thomas Martinez"

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T
Translon: a single term for translated regions.
Michał I Świrski, Jack A S Tierney, M Mar Albà, Dmitry E Andreev, Julie L Aspden, Thomas F Martinez

Nat Methods· October 2025

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Comparative Analysis of Primary and Liver Fibroblasts Reveals MET as a Potent Target in Pancreatic Cancer Metastasis.
Rima Singh, Natalie Yousefian, Walker M Allen, Cecily Anaraki, Alica K Beutel, Thomas F Martinez

bioRxiv· September 2025

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Mevalonate Biosynthesis is a Metabolic Vulnerability of Gemcitabine-resistant Pancreatic Cancer.
Alica K Beutel, Sabrina Calderon, Ethan Nghiem, Kevin Gulay, Leonor P S Santana, Thomas F Martinez

bioRxiv· September 2025

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High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.
Eric W Deutsch, Leron W Kok, Jonathan M Mudge, Jorge Ruiz-Orera, Ivo Fierro-Monti, Thomas F Martinez

bioRxiv· July 2025

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Detection of human unannotated microproteins by mass spectrometry-based proteomics: a community assessment.
Aaron Wacholder, Eric W Deutsch, Leron W Kok, Jip T van Dinter, Jiwon Lee, Thomas F Martinez

bioRxiv· July 2025

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An expanded reference catalog of translated open reading frames for biomedical research.
Sonia Chothani, Jorge Ruiz-Orera, Jack A S Tierney, Jim Clauwaert, Eric W Deutsch, Thomas F Martinez

bioRxiv· July 2025

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A large-scale sORF screen identifies putative microproteins involved in cancer cell fitness.
Dörte Schlesinger, Christopher Dirks, Carmen Navarro, Lorenzo Lafranchi, Anna Spinner, Thomas Farid Martinez

iScience· March 2025

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Ribosome profiling reveals hidden world of small proteins.
Gregory Tong, Thomas F Martinez

Trends Genet· February 2025

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Sex-dependent metabolic remodeling of kidneys revealed by arteriovenous metabolomics.
Miranda E Kelly, Lauren A Hoffner, Cuauhtemoc B Ramirez, Alexis L Anica, Joohwan Kim, Thomas F Martinez

bioRxiv· September 2024

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Fiber-Reinforced Equibiaxial Dielectric Elastomer Actuator for Out-of-Plane Displacement.
Simon Holzer, Stefania Konstantinidi, Markus Koenigsdorff, Thomas Martinez, Yoan Civet

Materials (Basel)· July 2024

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Post-Paralysis Upper Facial Movement Restoration in Real Time using Soft Actuators.
Stefania Konstantinidi, Baptiste Tankwa, Quentin De Menech, Thomas Martinez, Yoan Civet

Annu Int Conf IEEE Eng Med Biol Soc· July 2024

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Characterisation of Polymer Materials for the Development of an Artificial Urethra.
Quentin De Menech, Loriane Andre, Stefania Konstantinidi, Amine Benouhiba, Thomas Martinez

Annu Int Conf IEEE Eng Med Biol Soc· July 2024

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Comparison of software packages for detecting unannotated translated small open reading frames by Ribo-seq.
Gregory Tong, Nasun Hah, Thomas F Martinez

Brief Bioinform· May 2024

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Dielectric Elastomer Actuator-Based Valveless Impedance-Driven Pumping for Meso- and Macroscale Applications.
Amine Benouhiba, Armando Walter, Silje Ekroll Jahren, Thomas Martinez, Francesco Clavica

Soft Robot· April 2024

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The landscape of fetus metabolism in maternal hyperglycemia.
Miranda E Kelly, Thomas F Martinez, Cholsoon Jang

Trends Endocrinol Metab· April 2024

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Novel para-aortic cardiac assistance using a pre-stretched dielectric elastomer actuator.
Silje Ekroll Jahren, Thomas Martinez, Armando Walter, Francesco Clavica, Paul Philipp Heinisch

Interdiscip Cardiovasc Thorac Surg· March 2024

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Dielectric elastomer actuator-based valveless pump as Fontan failure assist device: introduction and preliminary study.
Amine Benouhiba, Armando Walter, Silje Ekroll Jahren, Thomas Martinez, Francesco Clavica

Interdiscip Cardiovasc Thorac Surg· March 2024

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Integrated workflow for discovery of microprotein-coding small open reading frames.
Kevin Cao, Yasamin Hajy Heydary, Gregory Tong, Thomas Farid Martinez

STAR Protoc· December 2023

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Comparison of software packages for detecting unannotated translated small open reading frames by Ribo-seq.
Gregory Tong, Nasun Hah, Thomas F Martinez

bioRxiv· December 2023

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Development of a lung-liver in vitro coculture model for inhalation-like toxicity assessment.
Sabrina Madiedo-Podvrsan, Louise Sebillet, Thomas Martinez, Salimata Bacari, Fengping Zhu

Toxicol In Vitro· October 2023

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Hemodynamic effects of a dielectric elastomer augmented aorta on aortic wave intensity: An in-vivo study.
Silje Ekroll Jahren, Thomas Martinez, Armando Walter, Lorenzo Ferrari, Francesco Clavica

J Biomech· October 2023

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Impact of Electronic Cigarettes, Heated Tobacco Products and Conventional Cigarettes on the Generation of Oxidative Stress and Genetic and Epigenetic Lesions in Human Bronchial Epithelial BEAS-2B Cells.
Gianni Zarcone, Marie Lenski, Thomas Martinez, Smaïl Talahari, Ophélie Simonin

Toxics· October 2023

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The TINCR ubiquitin-like microprotein is a tumor suppressor in squamous cell carcinoma.
Lucia Morgado-Palacin, Jessie A Brown, Thomas F Martinez, Juana M Garcia-Pedrero, Farhad Forouhar

Nat Commun· March 2023

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A novel soft cardiac assist device based on a dielectric elastomer augmented aorta: An in vivo study.
Thomas Martinez, Silje Ekroll Jahren, Armando Walter, Jonathan Chavanne, Francesco Clavica

Bioeng Transl Med· March 2023

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Profiling mouse brown and white adipocytes to identify metabolically relevant small ORFs and functional microproteins.
Thomas F Martinez, Sally Lyons-Abbott, Angie L Bookout, Eduardo V De Souza, Cynthia Donaldson

Cell Metab· January 2023

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