Publications by authors named "Thomas Transue"

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From Protein Sequence to Structure: The Next Frontier in Cross-Species Extrapolation for Chemical Safety Evaluations.
Carlie A LaLone, Donovan J Blatz, Marissa A Jensen, Sara M F Vliet, Sally Mayasich, Thomas R Transue

Environ Toxicol Chem· February 2023

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Demonstration of the Sequence Alignment to Predict Across Species Susceptibility Tool for Rapid Assessment of Protein Conservation.
Sara M F Vliet, Monique Hazemi, Donovan Blatz, Marissa Jensen, Sally Mayasich, Thomas R Transue

J Vis Exp· February 2023

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Linking in silico MS/MS spectra with chemistry data to improve identification of unknowns.
Andrew D McEachran, Ilya Balabin, Tommy Cathey, Thomas R Transue, Hussein Al-Ghoul

Sci Data· August 2019

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Evidence for Cross Species Extrapolation of Mammalian-Based High-Throughput Screening Assay Results.
Carlie A LaLone, Daniel L Villeneuve, Jon A Doering, Brett R Blackwell, Thomas R Transue

Environ Sci Technol· December 2018

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Aggregating data for computational toxicology applications: The U.S. Environmental Protection Agency (EPA) Aggregated Computational Toxicology Resource (ACToR) System.
Richard S Judson, Matthew T Martin, Peter Egeghy, Sumit Gangwal, David M Reif, Thomas Transue

Int J Mol Sci· September 2015

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Informing mechanistic toxicology with computational molecular models.
Michael R Goldsmith, Shane D Peterson, Daniel T Chang, Thomas R Transue, Rogelio Tornero-Velez

Methods Mol Biol· February 2013

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PAVA: physiological and anatomical visual analytics for mapping of tissue-specific concentration and time-course data.
Michael-Rock Goldsmith, Thomas R Transue, Daniel T Chang, Rogelio Tornero-Velez, Michael S Breen

J Pharmacokinet Pharmacodyn· June 2010

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ACToR--Aggregated Computational Toxicology Resource.
Richard Judson, Ann Richard, David Dix, Keith Houck, Fathi Elloumi, Thomas R Transue

Toxicol Appl Pharmacol· November 2008

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NMR and crystallographic characterization of adventitious borate binding by trypsin.
Thomas R Transue, Scott A Gabel, Robert E London

Bioconjug Chem· July 2006

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Molecular dynamics simulations of the d(CCAACGTTGG)(2) decamer in crystal environment: comparison of atomic point-charge, extra-point, and polarizable force fields.
Jason Baucom, Thomas Transue, Miguel Fuentes-Cabrera, J M Krahn, Thomas A Darden

J Chem Phys· October 2004

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X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Thomas R Transue, Joseph M Krahn, Scott A Gabel, Eugene F DeRose, Robert E London

Biochemistry· March 2004

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Structural analysis by X-ray crystallography and calorimetry of a haemagglutinin component (HA1) of the progenitor toxin from Clostridium botulinum.
Kaoru Inoue, Mack Sobhany, Thomas R Transue, Keiji Oguma, Lars C Pedersen

Microbiology (Reading)· December 2003

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