Publications by authors named "Thomas Trolle"

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Endogenous viral elements constitute a complementary source of antigens for personalized cancer vaccines.
Christian Garde, Michail A Pavlidis, Pablo Garces, Emma J Lange, Sri H Ramarathinam, Thomas Trolle

NPJ Vaccines· March 2025

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DNA based neoepitope vaccination induces tumor control in syngeneic mouse models.
Nadia Viborg, Michail Angelos Pavlidis, Marina Barrio-Calvo, Stine Friis, Thomas Trolle

NPJ Vaccines· May 2023

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Benchmarking freely available HLA typing algorithms across varying genes, coverages and typing resolutions.
Nikolas Hallberg Thuesen, Michael Schantz Klausen, Shyam Gopalakrishnan, Thomas Trolle, Gabriel Renaud

Front Immunol· November 2022

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KEYNOTE - D36: personalized immunotherapy with a neoepitope vaccine, EVX-01 and pembrolizumab in advanced melanoma.
Georgina V Long, Pier Francesco Ferrucci, Adnan Khattak, Tarek M Meniawy, Patrick Alexander Ott, Thomas Trolle

Future Oncol· October 2022

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Personalized therapy with peptide-based neoantigen vaccine (EVX-01) including a novel adjuvant, CAF®09b, in patients with metastatic melanoma.
Sofie Kirial Mørk, Mohammad Kadivar, Kalijn Fredrike Bol, Arianna Draghi, Marie Christine Wulff Westergaard, Thomas Trolle

Oncoimmunology· January 2022

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Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design.
Emma C Jappe, Christian Garde, Sri H Ramarathinam, Ethan Passantino, Patricia T Illing, Thomas Trolle

Nat Commun· December 2020

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Improved peptide-MHC class II interaction prediction through integration of eluted ligand and peptide affinity data.
Christian Garde, Sri H Ramarathinam, Emma C Jappe, Morten Nielsen, Jens V Kringelum, Thomas Trolle

Immunogenetics· July 2019

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Predicted MHC peptide binding promiscuity explains MHC class I 'hotspots' of antigen presentation defined by mass spectrometry eluted ligand data.
Emma Christine Jappe, Jens Kringelum, Thomas Trolle, Morten Nielsen

Immunology· July 2018

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An automated benchmarking platform for MHC class II binding prediction methods.
Massimo Andreatta, Thomas Trolle, Zhen Yan, Jason A Greenbaum, Bjoern Peters

Bioinformatics· May 2018

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The Length Distribution of Class I-Restricted T Cell Epitopes Is Determined by Both Peptide Supply and MHC Allele-Specific Binding Preference.
Thomas Trolle, Curtis P McMurtrey, John Sidney, Wilfried Bardet, Sean C Osborn

J Immunol· February 2016

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Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.
Curtis McMurtrey, Thomas Trolle, Tiffany Sansom, Soumya G Remesh, Thomas Kaever

Elife· January 2016

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Ebolavirus comparative genomics.
Se-Ran Jun, Michael R Leuze, Intawat Nookaew, Edward C Uberbacher, Miriam Land, Thomas Trolle

FEMS Microbiol Rev· September 2015

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Automated benchmarking of peptide-MHC class I binding predictions.
Thomas Trolle, Imir G Metushi, Jason A Greenbaum, Yohan Kim, John Sidney

Bioinformatics· July 2015

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NetTepi: an integrated method for the prediction of T cell epitopes.
Thomas Trolle, Morten Nielsen

Immunogenetics· August 2014

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