Publications by authors named "Tim Andersen"

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Engineering a custom-sized DNA scaffold for more efficient DNA origami-based nucleic acid data storage.
Sarah E Kobernat, Maryna Lazouskaya, Benjamin C Balzer, Amanda Wolf, Golam M Mortuza, Tim Andersen

Synth Biol (Oxf)· April 2025

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DNA-PAINT Probe Modifications Support High-Resolution Imaging with Shorter Binding Domains.
Luca Piantanida, George D Dickinson, Jacob M Majikes, William Clay, J Alexander Liddle, Tim Andersen

ACS Nano· August 2024

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In-vitro validated methods for encoding digital data in deoxyribonucleic acid (DNA).
Golam Md Mortuza, Jorge Guerrero, Shoshanna Llewellyn, Michael D Tobiason, George D Dickinson, Tim Andersen

BMC Bioinformatics· April 2023

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An alternative approach to nucleic acid memory.
George D Dickinson, Golam Md Mortuza, William Clay, Luca Piantanida, Christopher M Green, Tim Andersen

Nat Commun· April 2021

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A Coding Scheme for Nucleic Acid Memory (NAM).
Kelsey Suyehira, Simon Llewellyn, Reza M Zadegan, William L Hughes, Tim Andersen

IEEE Workshop Microelectron Electron Devices· April 2017

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Computational exploration of a protein receptor binding space with student proposed peptide ligands.
Matthew D King, Paul Phillips, Matthew W Turner, Michael Katz, Sarah Lew, Tim Andersen

Biochem Mol Biol Educ· October 2016

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GAMPMS: Genetic algorithm managed peptide mutant screening.
Thomas Long, Owen M McDougal, Tim Andersen

J Comput Chem· June 2015

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Homology modeling and molecular docking for the science curriculum.
Owen M McDougal, Nic Cornia, S V Sambasivarao, Andrew Remm, Chris Mallory, Tim Andersen

Biochem Mol Biol Educ· November 2014

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Design of a flexible component gathering algorithm for converting cell-based models to graph representations for use in evolutionary search.
Marianna Budnikova, Jeffrey W Habig, Daniel Lobo, Nicolas Cornia, Michael Levin, Tim Andersen

BMC Bioinformatics· June 2014

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Safeguarding forensic DNA reference samples with nullomer barcodes.
Jayita Goswami, Michael C Davis, Tim Andersen, Abdelkrim Alileche, Greg Hampikian

J Forensic Leg Med· July 2013

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Accessible high-throughput virtual screening molecular docking software for students and educators.
Reed B Jacob, Tim Andersen, Owen M McDougal

PLoS Comput Biol· May 2012

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DockoMatic: automated peptide analog creation for high throughput virtual screening.
Reed B Jacob, Casey W Bullock, Tim Andersen, Owen M McDougal

J Comput Chem· October 2011

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Dockomatic - automated ligand creation and docking.
Casey W Bullock, Reed B Jacob, Owen M McDougal, Greg Hampikian, Tim Andersen

BMC Res Notes· November 2010

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Shape homeostasis in virtual embryos.
Tim Andersen, Richard Newman, Tim Otter

Artif Life· May 2010

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A biologically derived approach to tissue modeling.
Tim Andersen, Tim Otter, Cap Petschulat, Ullysses Eoff, Tom Menten

Stud Health Technol Inform· August 2005

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