Publications by authors named "Tim Harder"

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PHAISTOS: a framework for Markov chain Monte Carlo simulation and inference of protein structure.
Wouter Boomsma, Jes Frellsen, Tim Harder, Sandro Bottaro, Kristoffer E Johansson

J Comput Chem· July 2013

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Unilateral access regulation: ground state dynamics of the Pseudomonas aeruginosa outer membrane efflux duct OprM.
Dennis C Koch, Martin Raunest, Tim Harder, Christian Kandt

Biochemistry· January 2013

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The Internet as Scientific Knowledge Base: Navigating the Chem-Bio Space.
Katrin Stierand, Tim Harder, Thomas Marek, Matthias Hilbig, Christian Lemmen

Mol Inform· August 2012

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An efficient null model for conformational fluctuations in proteins.
Tim Harder, Mikael Borg, Sandro Bottaro, Wouter Boomsma, Simon Olsson

Structure· June 2012

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Fast large-scale clustering of protein structures using Gauss integrals.
Tim Harder, Mikael Borg, Wouter Boomsma, Peter Røgen, Thomas Hamelryck

Bioinformatics· February 2012

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Generative probabilistic models extend the scope of inferential structure determination.
Simon Olsson, Wouter Boomsma, Jes Frellsen, Sandro Bottaro, Tim Harder

J Magn Reson· December 2011

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Beyond rotamers: a generative, probabilistic model of side chains in proteins.
Tim Harder, Wouter Boomsma, Martin Paluszewski, Jes Frellsen, Kristoffer E Johansson

BMC Bioinformatics· June 2010

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Using an alignment of fragment strings for comparing protein structures.
Iddo Friedberg, Tim Harder, Rachel Kolodny, Einat Sitbon, Zhanwen Li

Bioinformatics· January 2007

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JAFA: a protein function annotation meta-server.
Iddo Friedberg, Tim Harder, Adam Godzik

Nucleic Acids Res· July 2006

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