Publications by authors named "Tim Stevens"

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Differences in the functional use of two migratory stopovers by humpback whales (Megaptera novaeangliae).
Raphael Mayaud, Joshua N Smith, David Peel, Craig Wilson, Wally Franklin, Tim Stevens

PLoS One· May 2025

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Identification of cellular signatures associated with chinese hamster ovary cell adaptation for secretion of antibodies.
Ying Bai, Ivan Domenech Mercadé, Ramy Elgendy, Giulia Lambiase, Sew Peak-Chew, Tim J Stevens

Comput Struct Biotechnol J· December 2024

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Hardware implementation of backpropagation using progressive gradient descent for in situ training of multilayer neural networks.
Eveline R W van Doremaele, Tim Stevens, Stijn Ringeling, Simone Spolaor, Marco Fattori

Sci Adv· July 2024

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Enhancer-promoter interactions are reconfigured through the formation of long-range multiway hubs as mouse ES cells exit pluripotency.
David Lando, Xiaoyan Ma, Yang Cao, Aleksandra Jartseva, Tim J Stevens

Mol Cell· April 2024

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Cargo selective vesicle tethering: The structural basis for binding of specific cargo proteins by the Golgi tether component TBC1D23.
Jérôme Cattin-Ortolá, Jonathan G G Kaufman, Alison K Gillingham, Jane L Wagstaff, Sew-Yeu Peak-Chew, Tim J Stevens

Sci Adv· March 2024

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Reconstructing diploid 3D chromatin structures from single cell Hi-C data with a polymer-based approach.
Jan Rothörl, Maarten A Brems, Tim J Stevens, Peter Virnau

Front Bioinform· December 2023

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Functional unknomics: Systematic screening of conserved genes of unknown function.
João J Rocha, Satish Arcot Jayaram, Tim J Stevens, Nadine Muschalik, Rajen D Shah

PLoS Biol· August 2023

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Zasp52 strengthens whole embryo tissue integrity through supracellular actomyosin networks.
Dina J Ashour, Clinton H Durney, Vicente J Planelles-Herrero, Tim J Stevens, James J Feng

Development· April 2023

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De novo design of modular peptide-binding proteins by superhelical matching.
Kejia Wu, Hua Bai, Ya-Ting Chang, Rachel Redler, Kerrie E McNally, Tim J Stevens

Nature· April 2023

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Adaptive Biosensing and Neuromorphic Classification Based on an Ambipolar Organic Mixed Ionic-Electronic Conductor.
Yanxi Zhang, Eveline R W van Doremaele, Gang Ye, Tim Stevens, Jun Song

Adv Mater· May 2022

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GOLPH3 and GOLPH3L are broad-spectrum COPI adaptors for sorting into intra-Golgi transport vesicles.
Lawrence G Welch, Sew-Yeu Peak-Chew, Farida Begum, Tim J Stevens, Sean Munro

J Cell Biol· October 2021

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A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions.
Konstantin Barylyuk, Ludek Koreny, Huiling Ke, Simon Butterworth, Oliver M Crook, Tim J Stevens

Cell Host Microbe· November 2020

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Rate of Cognitive Decline in Alzheimer's Disease Stratified by Age.
Karen Stanley, Tim Whitfield, Karoline Kuchenbaecker, Oliver Sanders, Tim Stevens

J Alzheimers Dis· September 2020

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Rho-Kinase Planar Polarization at Tissue Boundaries Depends on Phospho-regulation of Membrane Residence Time.
Clara Sidor, Tim J Stevens, Li Jin, Jérôme Boulanger, Katja Röper

Dev Cell· February 2020

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Proteome Mapping of a Cyanobacterium Reveals Distinct Compartment Organization and Cell-Dispersed Metabolism.
Laura L Baers, Lisa M Breckels, Lauren A Mills, Laurent Gatto, Michael J Deery, Tim J Stevens

Plant Physiol· December 2019

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Separating Golgi Proteins from to Reveals Underlying Properties of Cisternal Localization.
Harriet T Parsons, Tim J Stevens, Heather E McFarlane, Silvia Vidal-Melgosa, Johannes Griss

Plant Cell· September 2019

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Triparental inheritance in .
Gareth Bloomfield, Peggy Paschke, Marina Okamoto, Tim J Stevens, Hideko Urushihara

Proc Natl Acad Sci U S A· February 2019

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Canonical and single-cell Hi-C reveal distinct chromatin interaction sub-networks of mammalian transcription factors.
Xiaoyan Ma, Daphne Ezer, Boris Adryan, Tim J Stevens

Genome Biol· October 2018

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Combining fluorescence imaging with Hi-C to study 3D genome architecture of the same single cell.
David Lando, Srinjan Basu, Tim J Stevens, Andy Riddell, Kai J Wohlfahrt

Nat Protoc· May 2018

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Prodromal Dementia with Lewy Bodies and Prodromal Alzheimer's Disease: A Comparison of the Cognitive and Clinical Profiles.
Dilman Sadiq, Tim Whitfield, Lean Lee, Tim Stevens, Sergi Costafreda

J Alzheimers Dis· March 2018

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Prion-like protein aggregates exploit the RHO GTPase to cofilin-1 signaling pathway to enter cells.
Zhen Zhong, Laura Grasso, Caroline Sibilla, Tim J Stevens, Nicholas Barry

EMBO J· March 2018

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Calculation of 3D genome structures for comparison of chromosome conformation capture experiments with microscopy: An evaluation of single-cell Hi-C protocols.
David Lando, Tim J Stevens, Srinjan Basu, Ernest D Laue

Nucleus· January 2018

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Multiple marker abundance profiling: combining selected reaction monitoring and data-dependent acquisition for rapid estimation of organelle abundance in subcellular samples.
Cornelia M Hooper, Tim J Stevens, Anna Saukkonen, Ian R Castleden, Pragya Singh

Plant J· December 2017

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Are There Knots in Chromosomes?
Jonathan T Siebert, Alexey N Kivel, Liam P Atkinson, Tim J Stevens, Ernest D Laue

Polymers (Basel)· August 2017

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3D structures of individual mammalian genomes studied by single-cell Hi-C.
Tim J Stevens, David Lando, Srinjan Basu, Liam P Atkinson, Yang Cao

Nature· April 2017

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