Publications by authors named "Timothy A Miller"

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Toward digital twins in the intensive care unit: a medication management case study.
Behnaz Eslami, Majid Afshar, Samie Tootooni, Timothy A Miller, Matthew M Churpek

J Am Med Inform Assoc· October 2025

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Toward Digital Twins in the Intensive Care Unit: A Medication Management Case Study.
Behnaz Eslami, Majid Afshar, Samie Tootooni, Timothy A Miller, Matthew M Churpek

medRxiv· August 2025

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Natural Language Processing to Build a Multicenter Computable Phenotype Library for Adults with Congenital Heart Disease.
Spencer Thomas, Angus Dawson, Hifsa Chaudhry, Sidra Ahmad, Xiyu Ding, Timothy A Miller

medRxiv· August 2025

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FDA Approval of Cardiac Valve Devices Implanted in a National Cohort of Pediatric Patients, 2016-2022.
Susmitha Wunnava, Timothy A Miller, Meena Nathan, Florence T Bourgeois

JAMA Pediatr· May 2025

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Lessons learned on information retrieval in electronic health records: a comparison of embedding models and pooling strategies.
Skatje Myers, Timothy A Miller, Yanjun Gao, Matthew M Churpek, Anoop Mayampurath

J Am Med Inform Assoc· February 2025

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When Raw Data Prevails: Are Large Language Model Embeddings Effective in Numerical Data Representation for Medical Machine Learning Applications?
Yanjun Gao, Skatje Myers, Shan Chen, Dmitriy Dligach, Timothy A Miller

Find ACL EMNLP· November 2024

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Generalizable clinical note section identification with large language models.
Weipeng Zhou, Timothy A Miller

JAMIA Open· October 2024

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Cumulus: a federated electronic health record-based learning system powered by Fast Healthcare Interoperability Resources and artificial intelligence.
Andrew J McMurry, Daniel I Gottlieb, Timothy A Miller, James R Jones, Ashish Atreja

J Am Med Inform Assoc· August 2024

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Moving Biosurveillance Beyond Coded Data Using AI for Symptom Detection From Physician Notes: Retrospective Cohort Study.
Andrew J McMurry, Amy R Zipursky, Alon Geva, Karen L Olson, James R Jones, Timothy A Miller

J Med Internet Res· April 2024

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Cumulus: A federated EHR-based learning system powered by FHIR and AI.
Andrew J McMurry, Daniel I Gottlieb, Timothy A Miller, James R Jones, Ashish Atreja

medRxiv· February 2024

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The SMART Text2FHIR Pipeline.
Timothy A Miller, Andrew J McMurry, James Jones, Daniel Gottlieb, Kenneth D Mandl

AMIA Annu Symp Proc· January 2024

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Improving model transferability for clinical note section classification models using continued pretraining.
Weipeng Zhou, Meliha Yetisgen, Majid Afshar, Yanjun Gao, Guergana Savova, Timothy A Miller

J Am Med Inform Assoc· December 2023

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A computable case definition for patients with SARS-CoV2 testing that occurred outside the hospital.
Lijing Wang, Amy R Zipursky, Alon Geva, Andrew J McMurry, Kenneth D Mandl, Timothy A Miller

JAMIA Open· October 2023

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Natural Language Processing to Automatically Extract the Presence and Severity of Esophagitis in Notes of Patients Undergoing Radiotherapy.
Shan Chen, Marco Guevara, Nicolas Ramirez, Arpi Murray, Jeremy L Warner, Timothy A Miller

JCO Clin Cancer Inform· July 2023

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Improving the Transferability of Clinical Note Section Classification Models with BERT and Large Language Model Ensembles.
Weipeng Zhou, Dmitriy Dligach, Majid Afshar, Yanjun Gao, Timothy A Miller

Proc Conf Assoc Comput Linguist Meet· July 2023

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Natural Language Processing Methods to Empirically Explore Social Contexts and Needs in Cancer Patient Notes.
Abigail Derton, Marco Guevara, Shan Chen, Shalini Moningi, David E Kozono, Timothy A Miller

JCO Clin Cancer Inform· May 2023

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Improving FDA postmarket adverse event reporting for medical devices.
Susmitha Wunnava, Timothy A Miller, Florence T Bourgeois

BMJ Evid Based Med· April 2023

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Improving Model Transferability for Clinical Note Section Classification Models Using Continued Pretraining.
Weipeng Zhou, Meliha Yetisgen, Majid Afshar, Yanjun Gao, Guergana Savova, Timothy A Miller

medRxiv· April 2023

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The SMART Text2FHIR Pipeline.
Timothy A Miller, Andrew J McMurry, James Jones, Daniel Gottlieb, Kenneth D Mandl

medRxiv· March 2023

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A computable phenotype for patients with SARS-CoV2 testing that occurred outside the hospital.
Lijing Wang, Amy Zipursky, Alon Geva, Andrew J McMurry, Kenneth D Mandl, Timothy A Miller

medRxiv· January 2023

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Classifying unstructured electronic consult messages to understand primary care physician specialty information needs.
Xiyu Ding, Michael Barnett, Ateev Mehrotra, Delphine S Tuot, Danielle S Bitterman, Timothy A Miller

J Am Med Inform Assoc· August 2022

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US Food and Drug Administration Approval of High-risk Cardiovascular Devices for Use in Children and Adolescents, 1977-2021.
Susmitha Wunnava, Timothy A Miller, Claire Narang, Meena Nathan, Florence T Bourgeois

JAMA· August 2022

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Correction to "Imaging Nanometer Phase Coexistence at Defects During the Insulator-Metal Phase Transformation in VO Thin Films by Resonant Soft X-ray Holography".
Luciana Vidas, Christian M Günther, Timothy A Miller, Bastian Pfau, Daniel Perez-Salinas

Nano Lett· September 2021

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Clinical Natural Language Processing for Radiation Oncology: A Review and Practical Primer.
Danielle S Bitterman, Timothy A Miller, Raymond H Mak, Guergana K Savova

Int J Radiat Oncol Biol Phys· July 2021

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Incorporating Risk Factor Embeddings in Pre-trained Transformers Improves Sentiment Prediction in Psychiatric Discharge Summaries.
Xiyu Ding, Mei-Hua Hall, Timothy A Miller

Proc Conf Empir Methods Nat Lang Process· November 2020

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