Publications by authors named "Timothy Daley"

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A prospective study of treatments for adult-onset divergence insufficiency-type esotropia.
Eric R Crouch, Trevano W Dean, Raymond T Kraker, Aaron M Miller, Courtney L Kraus, Timothy J Daley

J AAPOS· August 2021

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Predicting the Number of Bases to Attain Sufficient Coverage in High-Throughput Sequencing Experiments.
Chao Deng, Timothy Daley, Peter Calabrese, Jie Ren, Andrew D Smith

J Comput Biol· July 2020

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A benchmark of algorithms for the analysis of pooled CRISPR screens.
Sunil Bodapati, Timothy P Daley, Xueqiu Lin, James Zou, Lei S Qi

Genome Biol· March 2020

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CRISPR-mediated live imaging of genome editing and transcription.
Haifeng Wang, Muneaki Nakamura, Timothy R Abbott, Dehua Zhao, Kaiwen Luo, Timothy P Daley

Science· September 2019

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GEMINI: a variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens.
Mahdi Zamanighomi, Sidharth S Jain, Takahiro Ito, Debjani Pal, Timothy P Daley

Genome Biol· July 2019

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CRISPR-Mediated Programmable 3D Genome Positioning and Nuclear Organization.
Haifeng Wang, Xiaoshu Xu, Cindy M Nguyen, Yanxia Liu, Yuchen Gao, Timothy Daley

Cell· November 2018

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CRISPR Activation Screens Systematically Identify Factors that Drive Neuronal Fate and Reprogramming.
Yanxia Liu, Chen Yu, Timothy Patrick Daley, Fangyuan Wang, William S Cao

Cell Stem Cell· November 2018

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CRISPhieRmix: a hierarchical mixture model for CRISPR pooled screens.
Timothy P Daley, Zhixiang Lin, Xueqiu Lin, Yanxia Liu, Wing Hung Wong

Genome Biol· October 2018

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Unsupervised clustering and epigenetic classification of single cells.
Mahdi Zamanighomi, Zhixiang Lin, Timothy Daley, Xi Chen, Zhana Duren

Nat Commun· June 2018

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ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues.
Serghei Mangul, Harry Taegyun Yang, Nicolas Strauli, Franziska Gruhl, Hagit T Porath, Timothy Daley

Genome Biol· February 2018

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Enhancement of the optic nerve sheath and temporal arteries from giant cell arteritis.
John J Chen, Randy H Kardon, Timothy J Daley, Reid A Longmuir

Can J Ophthalmol· October 2015

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Applications of species accumulation curves in large-scale biological data analysis.
Chao Deng, Timothy Daley, Andrew D Smith

Quant Biol· September 2015

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Modeling genome coverage in single-cell sequencing.
Timothy Daley, Andrew D Smith

Bioinformatics· November 2014

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Sexual selection targets cetacean pelvic bones.
James P Dines, Erik Otárola-Castillo, Peter Ralph, Jesse Alas, Timothy Daley

Evolution· November 2014

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Patience is a virtue: an argument for delayed surgical intervention in fulminant Clostridium difficile colitis.
Jesse Clanton, Ryan Fawley, Nairmeen Haller, Timothy Daley, Joel Porter

Am Surg· June 2014

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Resolution of hypertropia with correction of intermittent exotropia.
Michael C Struck, Timothy J Daley

Br J Ophthalmol· October 2013

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Fulminant Clostridium difficile infection: An association with prior appendectomy?
Jesse Clanton, Michael Subichin, Katherine Drolshagen, Timothy Daley, Michael S Firstenberg

World J Gastrointest Surg· August 2013

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Predicting the molecular complexity of sequencing libraries.
Timothy Daley, Andrew D Smith

Nat Methods· April 2013

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2-Deoxy-D-glucose reduces epilepsy progression by NRSF-CtBP-dependent metabolic regulation of chromatin structure.
Mireia Garriga-Canut, Barry Schoenike, Romena Qazi, Karen Bergendahl, Timothy J Daley

Nat Neurosci· November 2006

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Localized domains of G9a-mediated histone methylation are required for silencing of neuronal genes.
Avtar Roopra, Romena Qazi, Barry Schoenike, Timothy J Daley, John F Morrison

Mol Cell· June 2004

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