Publications by authors named "Timothy E Mattes"

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Paraburkholderia Xenovorans Strain LB400 Significantly Decreased Volatilization of Polychlorinated Biphenyls (PCBs) from Freshwater and Saline Sediments.
David J Ramotowski, Andres Martinez, Rachel F Marek, Keri C Hornbuckle, Timothy E Mattes

ACS ES T Water· October 2025

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Development of a Novel PCB-Degrading Biofilm Enriched Biochar Encapsulated with Sol-Gel: A Protective Layer to Sustain Biodegradation Activity.
Qin Dong, Timothy E Mattes, Gregory H LeFevre

ACS ES T Eng· April 2025

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Metagenomes, metagenome-assembled genomes, and metatranscriptomes from a chlorinated ethene-dechlorinating culture amended with biochar pyrolyzed at different temperatures.
Hongyu Dang, Weilun Zhao, Timothy E Mattes

Microbiol Resour Announc· September 2024

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Black Carbon Impacts on Strain LB400 Cell Enrichment and Activity: Implications toward Lower-Chlorinated Polychlorinated Biphenyls Biodegradation Potential.
Qin Dong, Gregory H LeFevre, Timothy E Mattes

Environ Sci Technol· February 2024

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Genome-Resolved Metagenomics and Metatranscriptomics Reveal Insights into the Ecology and Metabolism of Anaerobic Microbial Communities in PCB-Contaminated Sediments.
Hongyu Dang, Jessica M Ewald, Timothy E Mattes

Environ Sci Technol· October 2023

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Reconnaissance of Oxygenic Denitrifiers in Agriculturally Impacted Soils.
Emily V Schmitz, Craig L Just, Keith Schilling, Matthew Streeter, Timothy E Mattes

mSphere· June 2023

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Lab-scale biodegradation assay using passive samplers to determine microorganisms' ability to reduce polychlorinated biphenyl (PCB) volatilization from contaminated sediment.
Christian M Bako, Andres Martinez, Rachel F Marek, Keri C Hornbuckle, Jerald L Schnoor, Timothy E Mattes

MethodsX· January 2023

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Aerobic Bioaugmentation to Decrease Polychlorinated Biphenyl (PCB) Emissions from Contaminated Sediments to Air.
Christian M Bako, Andres Martinez, Jessica M Ewald, Jason B X Hua, David J Ramotowski, Timothy E Mattes

Environ Sci Technol· October 2022

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Contrasting regulatory effects of organic acids on aerobic vinyl chloride biodegradation in etheneotrophs.
Weilun Zhao, Patrick M Richards, Timothy E Mattes

Appl Microbiol Biotechnol· September 2022

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Natural Biodegradation of Vinyl Chloride and cis-Dichloroethene in Aerobic and Suboxic Conditions.
Patrick M Richards, Jessica M Ewald, Weilun Zhao, Heather Rectanus, Dimin Fan, Timothy E Mattes

Environ Sci Pollut Res Int· August 2022

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Combined read- and assembly-based metagenomics to reconstruct a Dehalococcoides mccartyi genome from PCB-contaminated sediments and evaluate functional differences among organohalide-respiring consortia in the presence of different halogenated contaminants.
Jessica M Ewald, Jerald L Schnoor, Timothy E Mattes

FEMS Microbiol Ecol· July 2022

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Metagenomes, Metagenome-Assembled Genomes, and Metatranscriptomes from Polychlorinated Biphenyl-Contaminated Sediment Microcosms.
Jessica M Ewald, Jerald L Schnoor, Timothy E Mattes

Microbiol Resour Announc· July 2022

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Two Metatranscriptomic Profiles through Low-Dissolved-Oxygen Waters (DO, 0 to 33 µM) in the Eastern Tropical North Pacific Ocean.
Timothy E Mattes, Susan Burke, Gabrielle Rocap, Robert M Morris

Microbiol Resour Announc· February 2022

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Microbial communities in polychlorinated biphenyl (PCB)-contaminated wastewater lagoon sediments: PCB congener, quantitative PCR, and 16S rRNA gene amplicon sequencing datasets.
Timothy E Mattes, Jessica M Ewald, Yi Liang, Andres Martinez, Andrew M Awad

Data Brief· December 2021

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Metabolic flexibility of SUP05 under low DO growth conditions.
Timothy E Mattes, Anitra E Ingalls, Susan Burke, Robert M Morris

Environ Microbiol· June 2021

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Impacts of ammonia loading and biofilm age on the prevalence of nitrogen-cycling microorganisms in a full-scale submerged attached-growth reactor.
Weilun Zhao, Rebecca R Vermace, Timothy E Mattes, Craig Just

Water Environ Res· May 2021

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Dataset describing biodegradation of individual polychlorinated biphenyl congeners (PCBs) by LB400 in presence and absence of sediment slurry.
Christian M Bako, Timothy E Mattes, Rachel F Marek, Keri C Hornbuckle, Jerald L Schnoor

Data Brief· April 2021

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Biodegradation of PCB congeners by Paraburkholderia xenovorans LB400 in presence and absence of sediment during lab bioreactor experiments.
Christian M Bako, Timothy E Mattes, Rachel F Marek, Keri C Hornbuckle, Jerald L Schnoor

Environ Pollut· February 2021

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Detection of an alkene monooxygenase in vinyl chloride-oxidizing bacteria with GeneFISH.
Patrick M Richards, Timothy E Mattes

J Microbiol Methods· February 2021

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Growth of Dehalococcoides spp. and increased abundance of reductive dehalogenase genes in anaerobic PCB-contaminated sediment microcosms.
Jessica M Ewald, Shelby V Humes, Andres Martinez, Jerald L Schnoor, Timothy E Mattes

Environ Sci Pollut Res Int· March 2020

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Cryogenic soil coring reveals coexistence of aerobic and anaerobic vinyl chloride degrading bacteria in a chlorinated ethene contaminated aquifer.
Patrick M Richards, Yi Liang, Richard L Johnson, Timothy E Mattes

Water Res· June 2019

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Integrated methodological approach reveals microbial diversity and functions in aerobic groundwater microcosms adapted to vinyl chloride.
Xikun Liu, Yang Wu, Fernanda P Wilson, Ke Yu, Carly Lintner, Timothy E Mattes

FEMS Microbiol Ecol· September 2018

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PCB dechlorination hotspots and reductive dehalogenase genes in sediments from a contaminated wastewater lagoon.
Timothy E Mattes, Jessica M Ewald, Yi Liang, Andres Martinez, Andrew Awad

Environ Sci Pollut Res Int· June 2018

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Relationships between the Abundance and Expression of Functional Genes from Vinyl Chloride (VC)-Degrading Bacteria and Geochemical Parameters at VC-Contaminated Sites.
Yi Liang, Xikun Liu, Michael A Singletary, Kai Wang, Timothy E Mattes

Environ Sci Technol· November 2017

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Temporal abundance and activity trends of vinyl chloride (VC)-degrading bacteria in a dilute VC plume at Naval Air Station Oceana.
Yi Liang, Laura J Cook, Timothy E Mattes

Environ Sci Pollut Res Int· May 2017

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