Publications by authors named "Vincent Cabeli"

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CausalXtract, a flexible pipeline to extract causal effects from live-cell time-lapse imaging data.
Franck Simon, Maria Colomba Comes, Tiziana Tocci, Louise Dupuis, Vincent Cabeli

Elife· January 2025

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Deep learning uncovers histological patterns of YAP1/TEAD activity related to disease aggressiveness in cancer patients.
Benoit Schmauch, Vincent Cabeli, Omar Darwiche Domingues, Jean-Eudes Le Douget, Alexandra Hardy

iScience· January 2025

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Robust evaluation of deep learning-based representation methods for survival and gene essentiality prediction on bulk RNA-seq data.
Baptiste Gross, Antonin Dauvin, Vincent Cabeli, Virgilio Kmetzsch, Jean El Khoury

Sci Rep· July 2024

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Learning interpretable causal networks from very large datasets, application to 400,000 medical records of breast cancer patients.
Marcel da Câmara Ribeiro-Dantas, Honghao Li, Vincent Cabeli, Louise Dupuis, Franck Simon

iScience· May 2024

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PyDESeq2: a python package for bulk RNA-seq differential expression analysis.
Boris Muzellec, Maria Teleńczuk, Vincent Cabeli, Mathieu Andreux

Bioinformatics· September 2023

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Interactive exploration of a global clinical network from a large breast cancer cohort.
Nadir Sella, Anne-Sophie Hamy, Vincent Cabeli, Lauren Darrigues, Marick Laé

NPJ Digit Med· August 2022

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Inferring Gene Networks in Bone Marrow Hematopoietic Stem Cell-Supporting Stromal Niche Populations.
Christophe Desterke, Laurence Petit, Nadir Sella, Nathalie Chevallier, Vincent Cabeli

iScience· June 2020

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Learning clinical networks from medical records based on information estimates in mixed-type data.
Vincent Cabeli, Louis Verny, Nadir Sella, Guido Uguzzoni, Marc Verny

PLoS Comput Biol· May 2020

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