Publications by authors named "WenXing Hu"

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Azadirachtin inhibits RSV accumulation by disrupting the proliferation-apoptosis balance in Laodelphax striatellus.
Zhipeng Huang, Jiayi Gao, Yihui Tan, Wenxing Hu, Ke Wang

Pestic Biochem Physiol· January 2026

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SpatialPPIv2: Enhancing protein-protein interaction prediction through graph neural networks with protein language models.
Wenxing Hu, Masahito Ohue

Comput Struct Biotechnol J· November 2025

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Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE.
Amelia Schroeder, Melanie L Loth, Chunyu Luo, Sicong Yao, Hanying Yan, Wenxing Hu, Hui-Hsin Tsai

Nat Methods· September 2025

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C4d Immunoreactivity in Autoimmune and HBV-Induced Hepatitis: Implications for Complement-Mediated Hepatocellular Injury.
Ye Zheng, Haitao Tong, Wenjuan Guo, Ao Wang, Wenxing Hu

Pathophysiology· July 2025

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: a superfast and scalable single-cell RNA-seq data analysis pipeline powered by GPU.
Wenxing Hu, Haotian Zhang, Yu H Sun, Shaolong Cao, Jake Gagnon

Bioinform Adv· July 2025

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Ensemble learning based on bi-directional gated recurrent unit and convolutional neural network with word embedding module for bioactive peptide prediction.
Lai Zhenghui, Hu Wenxing, Wu Yan, Zhu Jihong, Xie Xiaojun

Food Chem· March 2025

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Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE.
Amelia Schroeder, Melanie Loth, Chunyu Luo, Sicong Yao, Hanying Yan, Wenxing Hu, Hui-Hsin Tsai

bioRxiv· March 2025

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Chitin Deacetylase Gene Family Positively Regulates the Accumulation of Rice Stripe Virus in Fallén (Hemiptera: Delphacidae) Ovaries.
Wenxing Hu, Ao You, Jiao Zhang, Yao Li, Shimin Zuo

Insects· March 2025

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An ensemble deep learning framework for multi-class LncRNA subcellular localization with innovative encoding strategy.
Wenxing Hu, Yan Yue, Ruomei Yan, Lixin Guan, Mengshan Li

BMC Biol· February 2025

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FundusNet: A Deep-Learning Approach for Fast Diagnosis of Neurodegenerative and Eye Diseases Using Fundus Images.
Wenxing Hu, Kejie Li, Jake Gagnon, Ye Wang, Talia Raney

Bioengineering (Basel)· January 2025

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SpatialPPI: Three-dimensional space protein-protein interaction prediction with AlphaFold Multimer.
Wenxing Hu, Masahito Ohue

Comput Struct Biotechnol J· December 2024

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Religious beliefs and social class identification: micro evidence from China.
Jianyi Jiao, Fan Chen, Suwei Gao, Wenxing Hu

BMC Psychol· November 2024

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Agrimonia pilosa ledeb alleviates inflammatory responses in diabetic kidney disease by inhibiting the JNK/p38 signaling pathway.
Zhi Liu, Wenxing Hu, Yanhui Li

Pak J Pharm Sci· July 2024

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A deep learning model for DNA enhancer prediction based on nucleotide position aware feature encoding.
Wenxing Hu, Yelin Li, Yan Wu, Lixin Guan, Mengshan Li

iScience· June 2024

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Essential genes identification model based on sequence feature map and graph convolutional neural network.
Wenxing Hu, Mengshan Li, Haiyang Xiao, Lixin Guan

BMC Genomics· January 2024

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Deep learning with explainability for characterizing age-related intrinsic differences in dynamic brain functional connectivity.
Chen Qiao, Bin Gao, Yuechen Liu, Xinyu Hu, Wenxing Hu

Med Image Anal· December 2023

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Monitoring of Single-Track Melting States Based on Photodiode Signal during Laser Powder Bed Fusion.
Longchao Cao, Wenxing Hu, Taotao Zhou, Lianqing Yu, Xufeng Huang

Sensors (Basel)· December 2023

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Parsing Netlists of Integrated Circuits from Images via Graph Attention Network.
Wenxing Hu, Xianke Zhan, Minglei Tong

Sensors (Basel)· December 2023

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Evaluation of a Series of Turnip Mosaic Virus Chimeric Clones Reveals Two Amino Acid Sites Critical for Systemic Infection in Chinese Cabbage.
Zhengxing Song, Eun-Young Seo, Wen-Xing Hu, Jung-Kyu Kim, Jun-Seong Kang

Phytopathology· October 2023

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Prediction of DNA Methylation based on Multi-dimensional feature encoding and double convolutional fully connected convolutional neural network.
Wenxing Hu, Lixin Guan, Mengshan Li

PLoS Comput Biol· August 2023

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RNASequest: An End-to-End Reproducible RNAseq Data Analysis and Publishing Framework.
Jing Zhu, Yu H Sun, Zhengyu Ouyang, Kejie Li, Soumya Negi, Wenxing Hu

J Mol Biol· July 2023

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Neutrophil extracellular traps facilitate cancer metastasis: cellular mechanisms and therapeutic strategies.
Wenxing Hu, Serene M L Lee, Alexandr V Bazhin, Markus Guba, Jens Werner

J Cancer Res Clin Oncol· May 2023

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scRNASequest: an ecosystem of scRNA-seq analysis, visualization, and publishing.
Kejie Li, Yu H Sun, Zhengyu Ouyang, Soumya Negi, Zhen Gao, Jing Zhu, Wenxing Hu, Dann Huh

BMC Genomics· May 2023

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Voltage-dependent anion channel 2 (VDAC2) facilitates the accumulation of rice stripe virus in the vector Laodelphax striatellus.
Lu Zhang, Linying Li, Lijun Huang, Xinyi Li, Chengzhu Xu, Wenxing Hu

Virus Res· January 2023

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Prediction of Antibody-Antigen Binding via Machine Learning: Development of Data Sets and Evaluation of Methods.
Chao Ye, Wenxing Hu, Bruno Gaeta

JMIR Bioinform Biotechnol· October 2022

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