Publications by authors named "William Gilpin"

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The cell as a token: high-dimensional geometry in language models and cell embeddings.
William Gilpin

Bioinformatics· November 2025

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Optimization hardness constrains ecological transients.
William Gilpin

PLoS Comput Biol· May 2025

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The neurobench framework for benchmarking neuromorphic computing algorithms and systems.
Jason Yik, Korneel Van den Berghe, Douwe den Blanken, Younes Bouhadjar, Maxime Fabre, William Gilpin

Nat Commun· February 2025

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Curiosity-driven search for novel nonequilibrium behaviors.
Martin J Falk, Finnegan D Roach, William Gilpin, Arvind Murugan

Phys Rev Res· July 2024

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Cellular automata as convolutional neural networks.
William Gilpin

Phys Rev E· September 2019

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Cryptic selection forces and dynamic heritability in generalized phenotypic evolution.
William Gilpin, Marcus W Feldman

Theor Popul Biol· February 2019

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Cryptographic hashing using chaotic hydrodynamics.
William Gilpin

Proc Natl Acad Sci U S A· May 2018

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Ecocultural range-expansion scenarios for the replacement or assimilation of Neanderthals by modern humans.
Joe Yuichiro Wakano, William Gilpin, Seiji Kadowaki, Marcus W Feldman, Kenichi Aoki

Theor Popul Biol· February 2018

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Flowtrace: simple visualization of coherent structures in biological fluid flows.
William Gilpin, Vivek N Prakash, Manu Prakash

J Exp Biol· October 2017

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A phase transition induces chaos in a predator-prey ecosystem with a dynamic fitness landscape.
William Gilpin, Marcus W Feldman

PLoS Comput Biol· July 2017

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An ecocultural model predicts Neanderthal extinction through competition with modern humans.
William Gilpin, Marcus W Feldman, Kenichi Aoki

Proc Natl Acad Sci U S A· February 2016

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PyPDB: a Python API for the Protein Data Bank.
William Gilpin

Bioinformatics· January 2016

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Worms under Pressure: Bulk Mechanical Properties of C. elegans Are Independent of the Cuticle.
William Gilpin, Sravanti Uppaluri, Clifford P Brangwynne

Biophys J· April 2015

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