Publications by authors named "Wilson McKerrow"

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LINE-1 expression in cancer correlates with p53 mutation, copy number alteration, and S phase checkpoint.
Wilson McKerrow, Xuya Wang, Carlos Mendez-Dorantes, Paolo Mita, Song Cao, Mark Grivainis, Li Ding, John LaCava, Kathleen H Burns, Jef D Boeke

Proc Natl Acad Sci U S A· February 2022

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Pan-cancer analysis reveals context-dependent roles of LINE-1 ORF1p in immune regulation and copy number alterations.
Efiyenia Ismini Kaparos, Wenjing Zhang, Ryusei Miyanaga, Wilson McKerrow, Jef Boeke

bioRxiv· November 2025

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Author Correction: Pan-cancer multi-omic model of LINE-1 activity reveals locus heterogeneity of retrotransposition efficiency.
Alexander Solovyov, Julie M Behr, David Hoyos, Eric Banks, Alexander W Drong, Wilson McKerrow

Nat Commun· March 2025

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Pan-cancer multi-omic model of LINE-1 activity reveals locus heterogeneity of retrotransposition efficiency.
Alexander Solovyov, Julie M Behr, David Hoyos, Eric Banks, Alexander W Drong, Wilson McKerrow

Nat Commun· February 2025

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Mapping of long interspersed element-1 (L1) insertions by TIPseq provides information about sub chromosomal genetic variation in human embryos.
Fabiana B Kohlrausch, Fang Wang, Wilson McKerrow, Mark Grivainis, David Fenyo

J Assist Reprod Genet· September 2024

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Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer.
Shrabanti Chowdhury, Jacob J Kennedy, Richard G Ivey, Oscar D Murillo, Noshad Hosseini, Wilson McKerrow

Cell· February 2024

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Parasite manipulation of host phenotypes inferred from transcriptional analyses in a trematode-amphipod system.
David M Rand, Joaquin C B Nunez, Shawn Williams, Stephen Rong, John T Burley, Wilson McKerrow

Mol Ecol· September 2023

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Proteogenomic insights suggest druggable pathways in endometrial carcinoma.
Yongchao Dou, Lizabeth Katsnelson, Marina A Gritsenko, Yingwei Hu, Boris Reva, Wilson McKerrow

Cancer Cell· September 2023

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Transposon insertion profiling by sequencing (TIPseq) identifies novel LINE-1 insertions in human sperm.
Thalita S Berteli, Fang Wang, Wilson McKerrow, Paula A Navarro, David Fenyo

J Assist Reprod Genet· August 2023

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Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer.
Shrabanti Chowdhury, Jacob J Kennedy, Richard G Ivey, Oscar D Murillo, Noshad Hosseini, Wilson McKerrow

Cell· August 2023

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Proteogenomic data and resources for pan-cancer analysis.
Yize Li, Yongchao Dou, Felipe Da Veiga Leprevost, Yifat Geffen, Anna P Calinawan, Wilson McKerrow

Cancer Cell· August 2023

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Vitrification with Dimethyl Sulfoxide Induces Transcriptomic Alteration of Gene and Transposable Element Expression in Immature Human Oocytes.
Ashley Wiltshire, Renata Schaal, Fang Wang, Tiffany Tsou, Wilson McKerrow

Genes (Basel)· June 2023

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LINE-1 retrotransposon expression in cancerous, epithelial and neuronal cells revealed by 5' single-cell RNA-Seq.
Wilson McKerrow, Larisa Kagermazova, Nicole Doudican, Nicholas Frazzette, Efiyenia Ismini Kaparos

Nucleic Acids Res· March 2023

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Quantification of LINE-1 RNA Expression from Bulk RNA-seq Using L1EM.
Wilson McKerrow

Methods Mol Biol· December 2022

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Affinity-Based Interactome Analysis of Endogenous LINE-1 Macromolecules.
Luciano H Di Stefano, Leila J Saba, Mehrnoosh Oghbaie, Hua Jiang, Wilson McKerrow

Methods Mol Biol· December 2022

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The role of retrotransposable elements in ageing and age-associated diseases.
Vera Gorbunova, Andrei Seluanov, Paolo Mita, Wilson McKerrow, David Fenyö

Nature· August 2021

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RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs.
Erica M Briggs, Wilson McKerrow, Paolo Mita, Jef D Boeke, Susan K Logan

Mob DNA· February 2021

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Human transposon insertion profiling by sequencing (TIPseq) to map LINE-1 insertions in single cells.
Wilson McKerrow, Zuojian Tang, Jared P Steranka, Lindsay M Payer, Jef D Boeke

Philos Trans R Soc Lond B Biol Sci· March 2020

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L1EM: a tool for accurate locus specific LINE-1 RNA quantification.
Wilson McKerrow, David Fenyö

Bioinformatics· February 2020

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LINE-1 ORF2p expression is nearly imperceptible in human cancers.
Daniel Ardeljan, Xuya Wang, Mehrnoosh Oghbaie, Martin S Taylor, David Husband, Wilson McKerrow

Mob DNA· December 2019

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Characterization and visualization of RNA secondary structure Boltzmann ensemble via information theory.
Luan Lin, Wilson H McKerrow, Bryce Richards, Chukiat Phonsom, Charles E Lawrence

BMC Bioinformatics· March 2018

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Predicting RNA hyper-editing with a novel tool when unambiguous alignment is impossible.
Wilson H McKerrow, Yiannis A Savva, Ali Rezaei, Robert A Reenan, Charles E Lawrence

BMC Genomics· July 2017

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SmCL3, a gastrodermal cysteine protease of the human blood fluke Schistosoma mansoni.
Jan Dvorák, Susan T Mashiyama, Mohammed Sajid, Simon Braschi, Melaine Delcroix, Wilson H McKerrow, James H McKerrow

PLoS Negl Trop Dis· June 2009

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