Publications by authors named "Xiangtao Li"

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scREPA: Predicting single-cell perturbation responses with cycle-consistent representation alignment.
Yuchen Wang, Xingjian Chen, Xiangtao Li, Ka-Chun Wong

Comput Biol Chem· February 2026

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The SNL Histone Deacetylase-Binding Factor GmHE13 Is a Novel Regulator of Soybean Hypocotyl Elongation.
Zhikang Shen, Lili Zhuang, Wenqian Zhang, Feifei Liang, Yaqi Peng, Xiangtao Li

Plant Biotechnol J· December 2025

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Dynamic Synthesis of Multi-Modal Representations for CITE-seq Data Integration and Analysis.
Yinan Shi, Yanchi Su, Yue Cheng, Ka-Chun Wong, Yunhe Wang, Xiangtao Li

Adv Sci (Weinh)· November 2025

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Hierarchical Multi-View Graph Diffusion Weighted Model for Cancer Subtype Identification.
Yunhe Wang, Hang Zhang, Zhengyu Du, Yanchi Su, Xiangtao Li

IEEE J Biomed Health Inform· November 2025

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Genetic Perturbation Modelling for Human Cell Therapy With BRNET.
Luyang Cai, Jixang Yu, Qiuzhen Lin, Lichen Liu, Xiangtao Li

IEEE J Biomed Health Inform· November 2025

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When East Meets West: Cross-Domain Drug Interaction Annotations With Large Language Models and Bidirectional Neural Networks.
Ruoxuan Zhang, Weidun Xie, Qiuzhen Lin, Xiangtao Li, Ka-Chun Wong

IEEE J Biomed Health Inform· October 2025

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A Comprehensive Evaluation of Arbitrary Image Style Transfer Methods.
Zijun Zhou, Fan Tang, Yuxin Zhang, Oliver Deussen, Juan Cao, Xiangtao Li

IEEE Trans Vis Comput Graph· September 2025

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Precision oncology informatics for anticancer drug combination responses: A systematic review.
Saifur Rahaman, Peter Wang, Jun Yu, Tania Rahman, Muhammad Toseef, Xiangtao Li

Comput Biol Med· September 2025

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Integrative genomic analysis identifies clinically relevant prognostic markers for colorectal cancer patients with liver metastasis.
Wentao Li, Ming Liu, Liula Wu, Bosen Zhu, Xiangtao Li, Yi Liang, Junqiong Lin

Clin Transl Oncol· August 2025

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DeepNanoHi-C: deep learning enables accurate single-cell nanopore long-read data analysis and 3D genome interpretation.
Wenjing Ma, Fuzhou Wang, Yi Fan, Gaoyang Hao, Yanchi Su, Xiangtao Li

Nucleic Acids Res· July 2025

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Unveiling Multi-Scale Architectural Features in Single-Cell Hi-C Data Using scCAFE.
Fuzhou Wang, Jiecong Lin, Hamid Alinejad-Rokny, Wenjing Ma, Lingkuan Meng, Xiangtao Li

Adv Sci (Weinh)· June 2025

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GmbHLH68 Integrates Short-Term Photothermal Signals to Regulate Soybean Flowering via GmFT2a.
Panpan Zhang, Meng Yuan, Wei Zhang, Ying Cao, Zhikang Shen, Xiangtao Li

Plant Cell Environ· June 2025

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Catalytic asymmetric photocycloaddition reactions mediated by enantioselective radical approaches.
Yanli Yin, Mengdi You, Xiangtao Li, Zhiyong Jiang

Chem Soc Rev· March 2025

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Topological identification and interpretation for single-cell epigenetic regulation elucidation in multi-tasks using scAGDE.
Gaoyang Hao, Yi Fan, Zhuohan Yu, Yanchi Su, Haoran Zhu, Xiangtao Li

Nat Commun· February 2025

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Accurate Spatial Heterogeneity Dissection and Gene Regulation Interpretation for Spatial Transcriptomics using Dual Graph Contrastive Learning.
Zhuohan Yu, Yuning Yang, Xingjian Chen, Ka-Chun Wong, Zhaolei Zhang, Xiangtao Li

Adv Sci (Weinh)· January 2025

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EnrichRBP: an automated and interpretable computational platform for predicting and analysing RNA-binding protein events.
Yubo Wang, Haoran Zhu, Yansong Wang, Yuning Yang, Yujian Huang, Xiangtao Li

Bioinformatics· December 2024

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Synergizing Anti-Cancer Drug Combinations With Dual-View Hypergraph Representation Fusion.
Jixiang Yu, Nanjun Chen, Linlin Cao, Ming Gao, Daizong Liu, Qiuzhen Lin, Xiangtao Li

IEEE J Biomed Health Inform· December 2024

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The long-term efficacy of radiofrequency ablation for varicose veins in patients with iliac vein compression.
Yuxiao Ma, Huan Zhang, Luyuan Niu, Yaping Feng, Changming Zhang, Xiangtao Li

Asian J Surg· November 2024

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Photoredox Catalytic Deracemization Enabled Enantioselective and Modular Access to Axially Chiral N-Arylquinazolinones.
Yilin Liu, Mengqi Chu, Xiangtao Li, Zheng Cao, Xiaowei Zhao, Yanli Yin

Angew Chem Int Ed Engl· October 2024

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Deciphering 3'UTR Mediated Gene Regulation Using Interpretable Deep Representation Learning.
Yuning Yang, Gen Li, Kuan Pang, Wuxinhao Cao, Zhaolei Zhang, Xiangtao Li

Adv Sci (Weinh)· October 2024

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PredGCN: a Pruning-enabled Gene-Cell Net for automatic cell annotation of single cell transcriptome data.
Qi Qi, Yunhe Wang, Yujian Huang, Yi Fan, Xiangtao Li

Bioinformatics· July 2024

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Unraveling Spatial Domain Characterization in Spatially Resolved Transcriptomics with Robust Graph Contrastive Clustering.
Yingxi Zhang, Zhuohan Yu, Ka-Chun Wong, Xiangtao Li

Bioinformatics· July 2024

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SOFB is a comprehensive ensemble deep learning approach for elucidating and characterizing protein-nucleic-acid-binding residues.
Bin Zhang, Zilong Hou, Yuning Yang, Ka-Chun Wong, Haoran Zhu, Xiangtao Li

Commun Biol· June 2024

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Quadruple primary tumors in a lynch syndrome patient surviving more than 26 years with genetic analysis: a case report and literature review.
Bosen Zhu, Ming Liu, Tianhao Mu, Wentao Li, Junqi Ren, Xiangtao Li, Yi Liang, Yulin Niu, Junqiong Lin

Front Oncol· June 2024

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TP-LMMSG: a peptide prediction graph neural network incorporating flexible amino acid property representation.
Nanjun Chen, Jixiang Yu, Liu Zhe, Fuzhou Wang, Xiangtao Li

Brief Bioinform· May 2024

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