Publications by authors named "Xingxin Pan"

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Spatial Proximity of Immune Cell Pairs to Cancer Cells in the Tumor Microenvironment as Biomarkers for Patient Stratification.
Jian-Rong Li, Xingxin Pan, Yupei Lin, Yanding Zhao, Yanhong Liu

Cancers (Basel)· July 2025

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Lineage Tracing and Single-Cell RNA Sequencing Reveal a Common Transcriptional State in Breast Cancer Tumor-Initiating Cells Characterized by IFN/STAT1 Activity.
Eric P Souto, Ping Gong, John D Landua, Ramakrishnan Rajaram Srinivasan, Abhinaya Ganesan, Xingxin Pan

Cancer Res· April 2025

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Influence of Endogenous Derivatives on the Chemical Sensing Performance of Carbonized Polymer Dots.
Yingxi Qin, Jie Chi, Wenkai Zhang, Xingxin Pan, Ziwei Liu

J Phys Chem Lett· March 2025

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The interferon/STAT1 signaling axis is a common feature of tumor-initiating cells in breast cancer.
Eric P Souto, Ping Gong, John D Landua, R Rajaram Srinivasan, Abhinaya Ganesan, Xingxin Pan

bioRxiv· August 2024

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Exploration of the intracellular chiral metabolome in pediatric BCP-ALL: a pilot study investigating the metabolic phenotype of IgH locus aberrations.
Meghan Collins, Ruggiero Gorgoglione, Valeria Impedovo, Xingxin Pan, Sathyaseelan Chakkarai

Front Oncol· August 2024

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Spatial imaging of glycoRNA in single cells with ARPLA.
Yuan Ma, Weijie Guo, Quanbing Mou, Xiangli Shao, Mingkuan Lyu, Xingxin Pan

Nat Biotechnol· April 2024

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The Development of Immunotherapy for the Treatment of Recurrent Glioblastoma.
Xudong Liu, Zihui Zhao, Wufei Dai, Kuo Liao, Qi Sun, Xingxin Pan

Cancers (Basel)· August 2023

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Alternative splicing of modulates killer lymphocyte-triggered pyroptosis.
Qing Kong, Shiyu Xia, Xingxin Pan, Kaixiong Ye, Zhouyihan Li

Sci Immunol· April 2023

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AD-Syn-Net: systematic identification of Alzheimer's disease-associated mutation and co-mutation vulnerabilities via deep learning.
Xingxin Pan, Zeynep H Coban Akdemir, Ruixuan Gao, Xiaoqian Jiang, Gloria M Sheynkman

Brief Bioinform· March 2023

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AI-DrugNet: A network-based deep learning model for drug repurposing and combination therapy in neurological disorders.
Xingxin Pan, Jun Yun, Zeynep H Coban Akdemir, Xiaoqian Jiang, Erxi Wu

Comput Struct Biotechnol J· February 2023

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Circulating metabolites associated with tumor hypoxia and early response to treatment in bevacizumab-refractory glioblastoma after combined bevacizumab and evofosfamide.
Alessia Lodi, Renu Pandey, Jennifer Chiou, Ayon Bhattacharya, Shiliang Huang, Xingxin Pan

Front Oncol· September 2022

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Multi-omics to characterize the functional relationships of R-loops with epigenetic modifications, RNAPII transcription and gene expression.
Xingxin Pan, L Frank Huang

Brief Bioinform· July 2022

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i-Modern: Integrated multi-omics network model identifies potential therapeutic targets in glioma by deep learning with interpretability.
Xingxin Pan, Brandon Burgman, Erxi Wu, Jason H Huang, Nidhi Sahni

Comput Struct Biotechnol J· June 2022

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Vitexin ameliorates glycochenodeoxycholate-induced hepatocyte injury through SIRT6 and JAK2/STAT3 pathways.
Chuang Zhang, Suolin Li, Chi Sun, Lin Liu, Yanbin Fang, Xingxin Pan

Iran J Basic Med Sci· December 2021

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DNA Methylation Markers for Pan-Cancer Prediction by Deep Learning.
Biao Liu, Yulu Liu, Xingxin Pan, Mengyao Li, Shuang Yang

Genes (Basel)· October 2019

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D-GPM: A Deep Learning Method for Gene Promoter Methylation Inference.
Xingxin Pan, Biao Liu, Xingzhao Wen, Yulu Liu, Xiuqing Zhang

Genes (Basel)· October 2019

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