Publications by authors named "Xuanping Zhang"

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TMBocelot: an omnibus statistical control model optimizing the TMB thresholds with systematic measurement errors.
Xin Lai, Shaoliang Wang, Xuanping Zhang, Xiaoyan Zhu, Yuqian Liu

Front Immunol· May 2025

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scMSI: Accurately inferring the sub-clonal Micro-Satellite status by an integrated deconvolution model on length spectrum.
Yuqian Liu, Yan Chen, Huanwen Wu, Xuanping Zhang, Yuqi Wang

PLoS Comput Biol· December 2024

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TCRcost: a deep learning model utilizing TCR 3D structure for enhanced of TCR-peptide binding.
Fan Li, Xinyang Qian, Xiaoyan Zhu, Xin Lai, Xuanping Zhang

Front Genet· October 2024

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Improved diagnostic efficiency of CRC subgroups revealed using machine learning based on intestinal microbes.
Guang Liu, Lili Su, Cheng Kong, Liang Huang, Xiaoyan Zhu, Xuanping Zhang

BMC Gastroenterol· September 2024

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Decreased NMIIA heavy chain phosphorylation at S1943 promotes mitoxantrone resistance by upregulating BCRP and N-cadherin expression in breast cancer cells.
Kemin Li, Tian Li, Yanan Niu, Yu Gao, Yifan Shi, Xuanping Zhang

Biochem Cell Biol· June 2024

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FAM83B promotes cell proliferation via regulating the expression of CDK4/CDK6/CCND1 complex in laryngeal squamous cell carcinoma.
Xiaoling Hu, Siwei Zou, Xiaoyu Shi, Qiangwei Zhang, Yanfei Li, Xuanping Zhang

Heliyon· May 2024

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DeepLION2: deep multi-instance contrastive learning framework enhancing the prediction of cancer-associated T cell receptors by attention strategy on motifs.
Xinyang Qian, Guang Yang, Fan Li, Xuanping Zhang, Xiaoyan Zhu

Front Immunol· March 2024

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Efficacy and safety of tai chi exercise on bone health: An umbrella review.
Jie Li, Jiaojiao Guo, Xi Wang, Xuanping Zhang, Yan Zhang

Osteoporos Int· November 2023

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Metformin Alleviates Sepsis-Associated Myocardial Injury by Enhancing AMP-Activated Protein Kinase/Mammalian Target of Rapamycin Signaling Pathway-Mediated Autophagy.
Yu Gao, Jiao Liu, Kemin Li, Tian Li, Ruihan Li, Wenlong Zhang, Xuanping Zhang

J Cardiovasc Pharmacol· October 2023

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miR-31 ameliorates type 2 diabetic vascular damage through up-regulation of hypoxia-inducible factor-1α/vascular endothelial growth factor-A.
Yuan Fu, Ruochen Du, Yufei Wang, Yitong Yuan, Yujuan Zhang, Xuanping Zhang

J Diabetes Investig· September 2023

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[Effect of deep needling "Tianshu" (ST25) on colonic motility in rats with slow transit constipation].
Qi Lü, Yu-Pei Sun, Xin Zhang, Xuan-Ping Zhang, Xiao-Kang Xu

Zhen Ci Yan Jiu· July 2023

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An independent evaluation in a CRC patient cohort of microbiome 16S rRNA sequence analysis methods: OTU clustering, DADA2, and Deblur.
Guang Liu, Tong Li, Xiaoyan Zhu, Xuanping Zhang, Jiayin Wang

Front Microbiol· July 2023

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What makes TMB an ambivalent biomarker for immunotherapy? A subtle mismatch between the sample-based design of variant callers and real clinical cohort.
Yuqian Liu, Shenjie Wang, Yixuan Wang, Yifei Li, Xiaoyan Zhu, Xuanping Zhang

Front Immunol· June 2023

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OCRFinder: a noise-tolerance machine learning method for accurately estimating open chromatin regions.
Jiayi Ren, Yuqian Liu, Xiaoyan Zhu, Xuwen Wang, Yifei Li, Xuanping Zhang

Front Genet· June 2023

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Acute and Subacute Toxicity Evaluation of Erythrocyte Membrane-Coated Boron Nitride Nanoparticles.
Jinfeng He, Xuanping Zhang, Linhong Liu, Yufei Wang, Renyu Liu

J Funct Biomater· March 2023

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[Adding acupoint identification into the textbook : preliminary assumption].
Rui-Qing Wang, Chun-Sheng Jia, Xuan-Ping Zhang, Xiao-Feng Li, Shen Zhang

Zhongguo Zhen Jiu· January 2023

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State-level metabolic comorbidity prevalence and control among adults age 50-plus with diabetes: estimates from electronic health records and survey data in five states.
Russell Mardon, Joanne Campione, Jennifer Nooney, Lori Merrill, Maurice Johnson, Xuanping Zhang

Popul Health Metr· December 2022

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DelInsCaller: An Efficient Algorithm for Identifying Delins and Estimating Haplotypes from Long Reads with High Level of Sequencing Errors.
Shenjie Wang, Xuanping Zhang, Geng Qiang, Jiayin Wang

Genes (Basel)· December 2022

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[Visual analysis of the acupoint prescription characteristics of acupuncture and moxibustion in treatment of rheumatoid arthritis].
Yi-Qing Zhang, Jing Wen, Ya-Nan Li, Ran-Ran Liu, Xuan-Ping Zhang, Xin Zhang

Zhongguo Zhen Jiu· November 2022

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Clinicopathological differences of high levels in colorectal cancer: A review and meta-analysis.
Yi Wang, Yuting Wen, Jiayin Wang, Xin Lai, Ying Xu, Xuanping Zhang

Front Microbiol· November 2022

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TMBcat: A multi-endpoint -value criterion on different discrepancy metrics for superiorly inferring tumor mutation burden thresholds.
Yixuan Wang, Xin Lai, Jiayin Wang, Ying Xu, Xuanping Zhang, Li Zhang

Front Immunol· October 2022

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[Analysis on clinical application characteristics of acupuncture and moxibustion in the treatment of Meniere's disease based on topology model by complex network].
Jing Wen, Peng Han, Hui-Hui Wu, Zi-di Zhang, Jing-Xuan Liu, Xin Zhang, Xuan-Ping Zhang

Zhen Ci Yan Jiu· October 2022

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PEcnv: accurate and efficient detection of copy number variations of various lengths.
Xuwen Wang, Ying Xu, Ruoyu Liu, Xin Lai, Yuqian Liu, Xuanping Zhang

Brief Bioinform· September 2022

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HRD-MILN: Accurately estimate tumor homologous recombination deficiency status from targeted panel sequencing data.
Xuwen Wang, Ying Xu, Yinbin Zhang, Shenjie Wang, Xuanping Zhang, Shuqun Zhang

Front Genet· September 2022

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AttnTAP: A Dual-input Framework Incorporating the Attention Mechanism for Accurately Predicting TCR-peptide Binding.
Ying Xu, Xinyang Qian, Yao Tong, Fan Li, Ke Wang, Xuanping Zhang

Front Genet· August 2022

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