Publications by authors named "Yaakov Levy"

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Ternary complexes in protein-DNA interactions: Kinetics and mechanisms.
Adina Hefetz, Elena Rogoulenko, Yaakov Levy

J Biol Chem· December 2025

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Multivalency in Tau-Microtubule interactions: Heterogeneous association and functional implications.
Segev Naveh-Tassa, Yaakov Levy

J Mol Biol· December 2025

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How the Extent of Protein Folding and Oligomerization Modulate Condensate Formation and Properties.
Ilan Edelstein, Yaakov Levy

J Phys Chem Lett· October 2025

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Ion-mediated effects of glycosylation on the disordered mucin domain: Insights from coarse-grained simulations.
Gargi Biswas, Yaakov Levy

Biophys J· September 2025

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RNA binding and coacervation promote preservation of peptide form and function across the heterochiral-homochiral divide.
Manas Seal, Ilan Edelstein, Yosef Scolnik, Orit Weil-Ktorza, Norman Metanis, Yaakov Levy

Protein Sci· September 2025

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Competition between Nucleic Acids and Intrinsically Disordered Regions within Proteins.
Xi Wang, Yaakov Levy, Junji Iwahara

Acc Chem Res· August 2025

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Intersegment Transfer and the Dynamical Architecture of Fis Protein-DNA Multimer Complexes.
Xun Chen, Shikai Jin, Cheng-Han Liu, Yaakov Levy, Min-Yeh Tsai

J Am Chem Soc· August 2025

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Theoretical Understanding of Target Search Dynamics in Horizontal Gene Transfer in Bacteria.
Natalie Collins, Yaakov Levy, Anatoly B Kolomeisky

J Phys Chem B· July 2025

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Functional Ambidexterity of an Ancient Nucleic Acid-Binding Domain.
Orit Weil-Ktorza, Segev Naveh-Tassa, Yael Fridmann-Sirkis, Dragana Despotović, Kesava Phaneendra Cherukuri, Yaakov Levy

Angew Chem Int Ed Engl· June 2025

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Inhibition of tau aggregation by the CCT3 and CCT7 apical domains.
Miki Ben-Maimon, Nadav Elad, Segev Naveh-Tassa, Yaakov Levy, Amnon Horovitz

Protein Sci· June 2025

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Partial wrapping of single-stranded DNA by replication protein A and modulation through phosphorylation.
Rahul Chadda, Vikas Kaushik, Iram Munir Ahmad, Jaigeeth Deveryshetty, Alex S Holehouse, Yaakov Levy

Nucleic Acids Res· October 2024

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Aromatic Residues in Proteins: Re-Evaluating the Geometry and Energetics of π-π, Cation-π, and CH-π Interactions.
Rivka Calinsky, Yaakov Levy

J Phys Chem B· September 2024

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A pH-Dependent Coarse-Grained Model for Disordered Proteins: Histidine Interactions Modulate Conformational Ensembles.
Rivka Calinsky, Yaakov Levy

J Phys Chem Lett· September 2024

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Histidine in Proteins: pH-Dependent Interplay between π-π, Cation-π, and CH-π Interactions.
Rivka Calinsky, Yaakov Levy

J Chem Theory Comput· August 2024

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Sound-mediated nucleation and growth of amyloid fibrils.
Anna Kozell, Aleksei Solomonov, Roman Gaidarov, Doron Benyamin, Irit Rosenhek-Goldian, Yaakov Levy

Proc Natl Acad Sci U S A· August 2024

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The structure of the Lujo virus spike complex.
Maayan Eilon-Ashkenazy, Hadas Cohen-Dvashi, Sarah Borni, Ron Shaked, Rivka Calinsky, Yaakov Levy

Nat Commun· August 2024

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Skipping events impose repeated binding attempts: profound kinetic implications of protein-DNA conformational changes.
Elena Rogoulenko, Yaakov Levy

Nucleic Acids Res· July 2024

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Ordered and disordered regions of the Origin Recognition Complex direct differential in vivo binding at distinct motif sequences.
Michal Chappleboim, Segev Naveh-Tassa, Miri Carmi, Yaakov Levy, Naama Barkai

Nucleic Acids Res· June 2024

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Sound-mediated nucleation and growth of amyloid fibrils.
Anna Kozell, Aleksei Solomonov, Roman Gaidarov, Doron Benyamin, Irit Rosenhek-Goldian, Yaakov Levy

bioRxiv· April 2024

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Rapid Long-distance Migration of RPA on Single Stranded DNA Occurs Through Intersegmental Transfer Utilizing Multivalent Interactions.
Sushil Pangeni, Gargi Biswas, Vikas Kaushik, Sahiti Kuppa, Olivia Yang, Yaakov Levy

J Mol Biol· March 2024

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Not Only Expansion: Proline Content and Density Also Induce Disordered Protein Conformation Compaction.
Milan Kumar Hazra, Yishai Gilron, Yaakov Levy

J Mol Biol· September 2023

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Cross-Talk of Cation-π Interactions with Electrostatic and Aromatic Interactions: A Salt-Dependent Trade-off in Biomolecular Condensates.
Milan Kumar Hazra, Yaakov Levy

J Phys Chem Lett· September 2023

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Negatively charged, intrinsically disordered regions can accelerate target search by DNA-binding proteins.
Xi Wang, Lavi S Bigman, Harry M Greenblatt, Binhan Yu, Yaakov Levy

Nucleic Acids Res· June 2023

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Protein Diffusion Along Protein and DNA Lattices: Role of Electrostatics and Disordered Regions.
Lavi S Bigman, Yaakov Levy

Annu Rev Biophys· May 2023

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Conformational Analysis of Charged Homo-Polypeptides.
Lavi S Bigman, Yaakov Levy

Biomolecules· February 2023

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