Publications by authors named "Yalan Sheng"

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SMAC: identifying DNA N6-methyladenine (6mA) at the single-molecule level using SMRT CCS data.
Haicheng Li, Junhua Niu, Yalan Sheng, Yifan Liu, Shan Gao

Brief Bioinform· March 2025

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Comprehensive genome annotation of the model ciliate Tetrahymena thermophila by in-depth epigenetic and transcriptomic profiling.
Fei Ye, Xiao Chen, Yuan Li, Aili Ju, Yalan Sheng

Nucleic Acids Res· January 2025

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Complex evolutionary patterns within the tubulin gene family of ciliates, unicellular eukaryotes with diverse microtubular structures.
Hua Su, Tingting Hao, Minjie Yu, Wuyu Zhou, Lei Wu, Yalan Sheng

BMC Biol· August 2024

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Semiconservative transmission of DNA -adenine methylation in a unicellular eukaryote.
Yalan Sheng, Yuanyuan Wang, Wentao Yang, Xue Qing Wang, Jiuwei Lu

Genome Res· June 2024

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Novel insights into molecular mechanisms of vegetative cell cycle and resting cyst formation in Apodileptus cf. visscheri (Alveolata, Ciliophora).
Jiahui Xu, Zhuo Shen, Minjie Yu, Yalan Sheng, Zhenzhen Yi

J Eukaryot Microbiol· March 2023

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Integrative studies on three new freshwater species (Ciliophora, Pleurostomatida) discovered in northern China.
Gongaote Zhang, Yalan Sheng, Yujie Liu, Xiao Cao, Saleh A Al-Farraj

Mar Life Sci Technol· November 2022

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The micronuclear histone H3 clipping in the unicellular eukaryote .
Fan Wei, Bo Pan, Jinghan Diao, Yuanyuan Wang, Yalan Sheng

Mar Life Sci Technol· November 2022

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Morphology and SSU rRNA gene-based phylogeny of three peniculid ciliates (Ciliophora, Oligohymenophorea) from China, including a new Frontonia species.
Tao Li, Mingjian Liu, Alan Warren, Saleh A Al-Farraj, Zhenzhen Yi, Yalan Sheng

Eur J Protistol· August 2022

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New contribution to the peritrichous genus Ophrydium (Protista, Ciliophora) with notes on the morphology, taxonomy, and phylogeny of a well-known species Ophrydium crassicaule Penard, 1922.
Tong Wu, Zhe Wang, Borong Lu, Jingtao Lei, Khaled A S Al-Rasheid, Yalan Sheng

J Eukaryot Microbiol· May 2022

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Case Study of the Response of N-Methyladenine DNA Modification to Environmental Stressors in the Unicellular Eukaryote Tetrahymena thermophila.
Yalan Sheng, Bo Pan, Fan Wei, Yuanyuan Wang, Shan Gao

mSphere· June 2021

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The completed macronuclear genome of a model ciliate Tetrahymena thermophila and its application in genome scrambling and copy number analyses.
Yalan Sheng, Lili Duan, Ting Cheng, Yu Qiao, Naomi A Stover

Sci China Life Sci· October 2020

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A distinct class of eukaryotic MT-A70 methyltransferases maintain symmetric DNA N6-adenine methylation at the ApT dinucleotides as an epigenetic mark associated with transcription.
Yuanyuan Wang, Yalan Sheng, Yongqiang Liu, Wenxin Zhang, Ting Cheng

Nucleic Acids Res· December 2019

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RNAi-dependent repression controls transposable elements in .
Xiaolu Zhao, Jie Xiong, Fengbiao Mao, Yalan Sheng, Xiao Chen

Genes Dev· March 2019

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Phylogenetic relationship analyses of complicated class Spirotrichea based on transcriptomes from three diverse microbial eukaryotes: Uroleptopsis citrina, Euplotes vannus and Protocruzia tuzeti.
Yalan Sheng, Ming He, Fangqing Zhao, Chen Shao, Miao Miao

Mol Phylogenet Evol· December 2018

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Morphology, morphogenesis and molecular phylogeny of a new brackish water subspecies, Neourostylopsis flava paraflava nov. subsp. (Ciliophora, Hypotrichia, Urostylidae), with redefinition of the genus Neourostylopsis.
Tengyue Zhang, Hongli Qi, Tengteng Zhang, Yalan Sheng, Alan Warren

Eur J Protistol· October 2018

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GPSit: An automated method for evolutionary analysis of nonculturable ciliated microeukaryotes.
Xiao Chen, Yurui Wang, Yalan Sheng, Alan Warren, Shan Gao

Mol Ecol Resour· May 2018

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N6-adenine DNA methylation is associated with the linker DNA of H2A.Z-containing well-positioned nucleosomes in Pol II-transcribed genes in Tetrahymena.
Yuanyuan Wang, Xiao Chen, Yalan Sheng, Yifan Liu, Shan Gao

Nucleic Acids Res· November 2017

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A comparative study of genome organization and epigenetic mechanisms in model ciliates, with an emphasis on Tetrahymena, Paramecium and Oxytricha.
Yurui Wang, Yuanyuan Wang, Yalan Sheng, Jie Huang, Xiao Chen

Eur J Protistol· October 2017

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N-methyladenine DNA modification in the unicellular eukaryotic organism Tetrahymena thermophila.
Yuanyuan Wang, Yalan Sheng, Yongqiang Liu, Bo Pan, Jie Huang

Eur J Protistol· April 2017

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