Publications by authors named "Yaming Yan"

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OPUS-Rota5: A highly accurate protein side-chain modeling method with 3D-Unet and RotaFormer.
Gang Xu, Zhenwei Luo, Yaming Yan, Qinghua Wang, Jianpeng Ma

Structure· July 2024

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Is there a finite mobility for the one vibrational mode Holstein model? Implications from real time simulations.
Tianchu Li, Yaming Yan, Qiang Shi

J Chem Phys· March 2024

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Revealing Intermolecular Electronic and Vibronic Coherence with Polarization-Dependent Two-Dimensional Beating Maps.
Xuan Leng, Yaming Yan, Ruidan Zhu, Jiading Zou, Wenzhao Zhang

J Phys Chem Lett· February 2023

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Taming Quantum Noise for Efficient Low Temperature Simulations of Open Quantum Systems.
Meng Xu, Yaming Yan, Qiang Shi, J Ankerhold, J T Stockburger

Phys Rev Lett· December 2022

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Application of the imaginary time hierarchical equations of motion method to calculate real time correlation functions.
Tao Xing, Tianchu Li, Yaming Yan, Shuming Bai, Qiang Shi

J Chem Phys· June 2022

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Generalized master equation for charge transport in a molecular junction: Exact memory kernels and their high order expansion.
Xiaohan Dan, Meng Xu, Yaming Yan, Qiang Shi

J Chem Phys· April 2022

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A low-temperature quantum Fokker-Planck equation that improves the numerical stability of the hierarchical equations of motion for the Brownian oscillator spectral density.
Tianchu Li, Yaming Yan, Qiang Shi

J Chem Phys· February 2022

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Understanding the Large Kinetic Isotope Effect of Hydrogen Tunneling in Condensed Phases by Using Double-Well Model Systems.
Yanying Liu, Yaming Yan, Tao Xing, Qiang Shi

J Phys Chem B· June 2021

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Efficient propagation of the hierarchical equations of motion using the Tucker and hierarchical Tucker tensors.
Yaming Yan, Meng Xu, Tianchu Li, Qiang Shi

J Chem Phys· May 2021

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Theoretical study on resonance Raman spectra of meso-tetrakis(3,5-di-tertiarybutylphenyl)-porphyrin due to the second-order Herzberg-Teller mechanism.
Ren-Hui Zheng, Wen-Mei Wei, Ya-Ming Yan

Spectrochim Acta A Mol Biomol Spectrosc· November 2020

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A new method to improve the numerical stability of the hierarchical equations of motion for discrete harmonic oscillator modes.
Yaming Yan, Tao Xing, Qiang Shi

J Chem Phys· November 2020

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Theoretical study of charge carrier transport in organic molecular crystals using the Nakajima-Zwanzig-Mori generalized master equation.
Yaming Yan, Meng Xu, Yanying Liu, Qiang Shi

J Chem Phys· June 2019

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Simulation of the Two-Dimensional Electronic Spectroscopy and Energy Transfer Dynamics of Light-Harvesting Complex II at Ambient Temperature.
Xuan Leng, Ya-Ming Yan, Rui-Dan Zhu, Kai Song, Yu-Xiang Weng

J Phys Chem B· May 2018

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Efficient propagation of the hierarchical equations of motion using the matrix product state method.
Qiang Shi, Yang Xu, Yaming Yan, Meng Xu

J Chem Phys· May 2018

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Convergence of high order memory kernels in the Nakajima-Zwanzig generalized master equation and rate constants: Case study of the spin-boson model.
Meng Xu, Yaming Yan, Yanying Liu, Qiang Shi

J Chem Phys· April 2018

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In Situ Visualization of Assembly and Photonic Signal Processing in a Triplet Light-Harvesting Nanosystem.
Meng-Jia Sun, Yingying Liu, Yaming Yan, Rui Li, Qiang Shi

J Am Chem Soc· March 2018

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Understanding the free energy barrier and multiple timescale dynamics of charge separation in organic photovoltaic cells.
Yaming Yan, Linze Song, Qiang Shi

J Chem Phys· February 2018

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