Publications by authors named "Yanming Di"

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Transcriptomic profiling of eyeless Drosophila reveals molecular network orchestrating response to blue light.
Jun Yang, Song Yujuan, Rujul Kumar, Subisha Sundaram, Benjamin Ramsell, Yanming Di

J Photochem Photobiol B· October 2025

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Tropical Fruit Aroma in White Wines: Exploring the Role of Esters and Thiols in Chardonnay and Sauvignon Blanc Wines.
Angelica Iobbi, Elizabeth Tomasino, Yanming Di

J Food Sci· September 2025

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Time-series modeling of epidemics in complex populations: Detecting changes in incidence volatility over time.
Rachael Aber, Yanming Di, Benjamin D Dalziel

PLoS Comput Biol· July 2025

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Revealing the sensory impact of different levels and combinations of esters and volatile thiols in Chardonnay wines.
Angelica Iobbi, Yanming Di, Elizabeth Tomasino

Heliyon· January 2023

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Characterizing the extracellular matrix transcriptome of cervical, endometrial, and uterine cancers.
Carson J Cook, Andrew E Miller, Thomas H Barker, Yanming Di, Kaitlin C Fogg

Matrix Biol Plus· August 2022

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[Analysis on Diversity of Plankton Microbial Community in the Beijing-Tianjin-Hebei Section of the North Canal River].
Zhi-Zhi Guo, Zhen-Hua Su, Yan-Ming Di, Xiao-Yu Guo

Huan Jing Ke Xue· February 2022

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[Analysis on the Spatial Variability Mechanism of the Characteristic Water Quality Factors of Urban River Channel Reclaimed Water].
Quan-Zhong Liu, Ke Peng, Zhen-Hua Su, Yan-Ming Di, Xiao-Yu Guo

Huan Jing Ke Xue· January 2022

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[Contrasting Analysis of Microbial Community Composition in the Water and Sediments of the North Canal Based on 16S rRNA High-Throughput Sequencing].
Ke Peng, Zhi Dong, Yan-Ming Di, Xiao-Yu Guo

Huan Jing Ke Xue· November 2021

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[Analysis of the Spatial Changes in Bacterial Communities in Urban Reclaimed Water Channel Sediments: A Case Study of the North Canal River].
Ying Qiu, Yan Jin, Zhen-Hua Su, Yan-Ming Di, Dong-Liang Zhao

Huan Jing Ke Xue· May 2021

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Test-statistic correlation and data-row correlation.
Bin Zhuo, Duo Jiang, Yanming Di

Stat Probab Lett· December 2020

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Model-Based Clustering with Measurement or Estimation Errors.
Wanli Zhang, Yanming Di

Genes (Basel)· February 2020

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Searching for best lower dimensional visualization angles for high dimensional RNA-Seq data.
Wanli Zhang, Yanming Di

PeerJ· July 2018

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[Effect of Reclaimed Water on Bacterial Community Composition and Function in Urban River Sediment].
Yan-Ming Di, Guang-Xuan Wang, Xing-Ru Huang, Xiao-Yu Guo

Huan Jing Ke Xue· February 2017

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Identifying stably expressed genes from multiple RNA-Seq data sets.
Bin Zhuo, Sarah Emerson, Jeff H Chang, Yanming Di

PeerJ· December 2016

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The level of residual dispersion variation and the power of differential expression tests for RNA-Seq data.
Gu Mi, Yanming Di

PLoS One· April 2016

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Goodness-of-fit tests and model diagnostics for negative binomial regression of RNA sequencing data.
Gu Mi, Yanming Di, Daniel W Schafer

PLoS One· March 2016

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The spatial-temporal variations of water quality in controlling points of the main rivers flowing into the Miyun Reservoir from 1991 to 2011.
Dongqing Li, Ji Liang, Yanming Di, Huili Gong, Xiaoyu Guo

Environ Monit Assess· January 2016

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Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides.
C Alisha Quandt, Yanming Di, Justin Elser, Pankaj Jaiswal, Joseph W Spatafora

G3 (Bethesda)· January 2016

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Single-gene negative binomial regression models for RNA-Seq data with higher-order asymptotic inference.
Yanming Di

Stat Interface· January 2015

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Family-based association test using normal approximation to gene dropping null distribution.
Yuan Jiang, Sarah Emerson, Lu Wang, Lujing Li, Yanming Di

BMC Proc· December 2014

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A comparative study of ripening among berries of the grape cluster reveals an altered transcriptional programme and enhanced ripening rate in delayed berries.
Satyanarayana Gouthu, Shawn T O'Neil, Yanming Di, Mitra Ansarolia, Molly Megraw

J Exp Bot· November 2014

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Methylome reorganization during in vitro dedifferentiation and regeneration of Populus trichocarpa.
Kelly Vining, Kyle R Pomraning, Larry J Wilhelm, Cathleen Ma, Matteo Pellegrini, Yanming Di

BMC Plant Biol· June 2013

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The genome of tolypocladium inflatum: evolution, organization, and expression of the cyclosporin biosynthetic gene cluster.
Kathryn E Bushley, Rajani Raja, Pankaj Jaiswal, Jason S Cumbie, Mariko Nonogaki, Yanming Di

PLoS Genet· June 2013

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Length bias correction in gene ontology enrichment analysis using logistic regression.
Gu Mi, Yanming Di, Sarah Emerson, Jason S Cumbie, Jeff H Chang

PLoS One· April 2013

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Higher order asymptotics for negative binomial regression inferences from RNA-sequencing data.
Yanming Di, Sarah C Emerson, Daniel W Schafer, Jeffrey A Kimbrel, Jeff H Chang

Stat Appl Genet Mol Biol· March 2013

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