Publications by authors named "Yoshiya Oda"

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Proteogenomics in cerebrospinal fluid and plasma reveals new biological fingerprint of cerebral small vessel disease.
Ilana Caro, Daniel Western, Shinichi Namba, Na Sun, Shuji Kawaguchi, Yoshiya Oda

Nat Aging· December 2025

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Identification and replication of sex-dimorphic protein quantitative trait loci across multiple ancestries and their associations with diseases.
Youngjune Bhak, Vasilis Raptis, Yunye He, Tomoko Nakanishi, Erin Macdonald-Dunlop, Yoshiya Oda

Sci Rep· August 2025

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Dissecting cross-population polygenic heterogeneity across respiratory and cardiometabolic diseases.
Yuji Yamamoto, Yuya Shirai, Kyuto Sonehara, Shinichi Namba, Takafumi Ojima, Yoshiya Oda

Nat Commun· April 2025

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Germline variants and mosaic chromosomal alterations affect COVID-19 vaccine immunogenicity.
Kyuto Sonehara, Yoshifumi Uwamino, Ryunosuke Saiki, Masaru Takeshita, Shinichi Namba, Yoshiya Oda

Cell Genom· March 2025

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PNPLA6 regulates retinal homeostasis by choline through phospholipid turnover.
Takashi Ono, Yoshitaka Taketomi, Takayoshi Higashi, Hiroyasu Sato, Chika Mochizuki-Ono, Yoshiya Oda

Nat Commun· March 2025

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Lipid-orchestrated paracrine circuit coordinates mast cell maturation and anaphylaxis through functional interaction with fibroblasts.
Yoshitaka Taketomi, Takayoshi Higashi, Kuniyuki Kano, Yoshimi Miki, Chika Mochizuki, Yoshiya Oda

Immunity· August 2024

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Plasma proteomics and lipidomics facilitate elucidation of the link between Alzheimer's disease development and vessel wall fragility.
Suzumi M Tokuoka, Fumie Hamano, Ayako Kobayashi, Shungo Adachi, Tomohiro Andou, Yoshiya Oda

Sci Rep· August 2024

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Proteogenomics in cerebrospinal fluid and plasma reveals new biological fingerprint of cerebral small vessel disease.
Stephanie Debette, Ilana Caro, Daniel Western, Shinichi Namba, Na Sun, Yoshiya Oda

Res Sq· July 2024

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Sarcopenia phenotype and impaired muscle function in male mice with fast-twitch muscle-specific knockout of the androgen receptor.
Tatsuya Hosoi, Mitsutaka Yakabe, Hiroko Sasakawa, Takayoshi Sasako, Kohjiro Ueki, Yoshiya Oda

Proc Natl Acad Sci U S A· January 2023

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TRACES: A Lightweight Browser for Liquid Chromatography-Multiple Reaction Monitoring-Mass Spectrometry Chromatograms.
Yoshihiro Kita, Suzumi M Tokuoka, Yoshiya Oda, Takao Shimizu

Metabolites· April 2022

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Lipid Profiles of Human Serum Fractions Enhanced with CD9 Antibody-Immobilized Magnetic Beads.
Suzumi M Tokuoka, Yoshihiro Kita, Masaya Sato, Takao Shimizu, Yutaka Yatomi, Yoshiya Oda

Metabolites· March 2022

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Comparative Evaluation of Plasma Metabolomic Data from Multiple Laboratories.
Shin Nishiumi, Yoshihiro Izumi, Akiyoshi Hirayama, Masatomo Takahashi, Motonao Nakao, Yoshiya Oda

Metabolites· February 2022

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Multi-Omics Analysis to Generate Hypotheses for Mild Health Problems in Monkeys.
Fumie Hamano, Suzumi M Tokuoka, Megumi Ishibashi, Yasuto Yokoi, Dieter M Tourlousse, Yoshiya Oda

Metabolites· October 2021

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Development of Tandem Mass Tag Labeling Method for Lipid Molecules Containing Carboxy and Phosphate Groups, and Their Stability in Human Serum.
Suzumi M Tokuoka, Yoshihiro Kita, Masaya Sato, Takao Shimizu, Yutaka Yatomi, Yoshiya Oda

Metabolites· December 2020

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Limitations of deuterium-labeled internal standards for quantitative electrospray ionization mass spectrometry analysis of fatty acid metabolites.
Suzumi M Tokuoka, Atsushi Yasumoto, Yoshihiro Kita, Takao Shimizu, Yutaka Yatomi, Yoshiya Oda

Rapid Commun Mass Spectrom· July 2020

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Isobaric mass tagging and triple quadrupole mass spectrometry to determine lipid biomarker candidates for Alzheimer's disease.
Suzumi M Tokuoka, Yoshihiro Kita, Takao Shimizu, Yoshiya Oda

PLoS One· April 2020

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Inter-Laboratory Comparison of Metabolite Measurements for Metabolomics Data Integration.
Yoshihiro Izumi, Fumio Matsuda, Akiyoshi Hirayama, Kazutaka Ikeda, Yoshihiro Kita, Yoshiya Oda

Metabolites· October 2019

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Peptide Peak Detection for Low Resolution MALDI-TOF Mass Spectrometry.
Jingwen Yao, Shin-Ichi Utsunomiya, Shigeki Kajihara, Tsuyoshi Tabata, Ken Aoshima, Yoshiya Oda

Mass Spectrom (Tokyo)· January 2016

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Gene expression profiling reveals epithelial mesenchymal transition (EMT) genes can selectively differentiate eribulin sensitive breast cancer cells.
Zoltán Dezső, Judith Oestreicher, Amy Weaver, Stephanie Santiago, Sergei Agoulnik, Yoshiya Oda

PLoS One· October 2015

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GlycanAnalysis Plug-in: a database search tool for N-glycan structures using mass spectrometry.
Kentaro Morimoto, Takashi Nishikaze, Akiyasu C Yoshizawa, Shigeki Kajihara, Ken Aoshima, Yoshiya Oda

Bioinformatics· July 2015

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Reduced plasma desmosterol-to-cholesterol ratio and longitudinal cognitive decline in Alzheimer's disease.
Yoshiaki Sato, Francois Bernier, Yasukazu Yamanaka, Ken Aoshima, Yoshiya Oda

Alzheimers Dement (Amst)· March 2015

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A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry.
Ken Aoshima, Kentaro Takahashi, Masayuki Ikawa, Takayuki Kimura, Mitsuru Fukuda, Yoshiya Oda

BMC Bioinformatics· November 2014

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Eribulin mesylate reduces tumor microenvironment abnormality by vascular remodeling in preclinical human breast cancer models.
Yasuhiro Funahashi, Kiyoshi Okamoto, Yusuke Adachi, Taro Semba, Mai Uesugi, Yoshiya Oda

Cancer Sci· October 2014

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Mass++: A Visualization and Analysis Tool for Mass Spectrometry.
Satoshi Tanaka, Yuichiro Fujita, Howell E Parry, Akiyasu C Yoshizawa, Kentaro Morimoto, Yoshiya Oda

J Proteome Res· August 2014

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Eribulin mesylate exerts specific gene expression changes in pericytes and shortens pericyte-driven capillary network in vitro.
Sergei I Agoulnik, Satoshi Kawano, Noel Taylor, Judith Oestreicher, Junji Matsui, Yoshiya Oda

Vasc Cell· March 2014

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