TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines.

Dmitry Ershov, Minh-Son Phan, Joanna W Pylvänäinen, Stéphane U Rigaud, Laure Le Blanc, Arthur Charles-Orszag, James R W Conway, Romain F Laine, Nathan H Roy, Daria Bonazzi, Guillaume Duménil, Guillaume Jacquemet, Jean-Yves Tinevez

July 2022 Nat Methods

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Abstract Synopsis

  • TrackMate 7 is an upgraded version of an automated bioimage tracking software that is available as a Fiji plugin, intended to help researchers analyze biological images more effectively.
  • The new version incorporates cutting-edge segmentation algorithms into its tracking processes, enabling more accurate identification and tracking of biological features in complex images.
  • Both qualitative and quantitative tests show that TrackMate 7 performs well across various bioimaging experiments, addressing many modern research challenges.]