Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including experimental design and analyses @GenomeMedicine: https://t.co/z7k5rWpWuv https://t.co/pZRuy3KRft
An introduction to spatial transcriptomics for biomedical research.
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Jul 2022 – Aug 2024Where it's discussed
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X / Twitter101 posts
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News17 articles
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YouTube2 videos
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What people are saying
Discussions indicate a clear excitement around spatial transcriptomics, with phrases like 'nice review' and 'detailed introduction' being cited repeatedly, which helps convey a supportive tone. Posts also emphasize the need for guidance in implementing these techniques, such as the mention of entry-level bioinformatics advice. Users who reference specific technologies like Visium and STomics indicate a deeper engagement with the article, contributing to a perception of high potential impact in the field.
A majority of discussions reflect supportive sentiments toward the publication and its contributions to the field of spatial transcriptomics.
There is a notable enthusiasm for the subject matter, with many users expressing a strong desire to learn more.
While many conversations reference aspects of the review, some users provide deeper commentary on methods and applications.
Several posts highlight the publication's potential to greatly influence future biomedical research, showcasing its relevance.
Abstract in brief
- Spatial transcriptomics enables high-dimensional gene expression analysis in tissue while maintaining spatial context, addressing limitations of traditional single-cell RNA sequencing.
- Various methods are introduced, including spatial arrays and imaging techniques, each with unique spatial resolution and suitability for different research needs.
- The text also covers bioinformatics strategies for data analysis and integration, offering guidance for researchers interested in applying spatial transcriptomics in biomedical studies.
Top posts
Most liked on X and BlueskyAn introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
Nice review, but worth noting that single cell RNA sequencing has been around for several decades. https://t.co/AhOSlBvrnu
A
#Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analyses: @GenomeMedicine https://t.co/fQxXkCNhTw #scienceresearch #science #scRNAseq #Bioinformatics #meded https://t.co/7dueYVACQc
An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great
All mentions
Single-Cell RNA Sequencing Analysis with Python for Biomedical Research
RNA sequencing (RNA-seq) enables quantifying messenger RNA in samples, advancing medical research. This video provides practical guidance on conducting single-cell RNA-seq studies, including hardware, protocols, quality…
Understanding Spatial Transcriptomics in Biomedical Research
Spatial transcriptomics enables high-dimensional gene expression analysis while maintaining spatial context. This video discusses various methods, including spatial arrays and imaging techniques, and offers guidance for…
https://t.co/QcXcKuhJ5s
@Cam_Williams999 wrote a review on Spatial Transcriptomics, https://t.co/6jqx5UumoU and is keen to discuss “casting” of single transcriptomes onto Curio and STomics arrays @insitubiology @curiobio @BGI_Genomics #KSSingleCell24 @TheDohertyInst
For those at #ICG2023 wanting to learn about Spatial Transcriptomics, perhaps read our Genome Medicine Review https://t.co/6jqx5UumoU
Day 3: An introduction to spatial transcriptomics for biomedical research.https://t.co/kzD8F4XMpi I made some interesting (read: olodo
An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/gFanr83Qer
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @mikemc43: Nice review, but worth noting that single cell RNA sequencing has been around for several decades. https://t.co/AhOSlBvrnu
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @mikemc43: Nice review, but worth noting that single cell RNA sequencing has been around for several decades. https://t.co/AhOSlBvrnu
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @mikemc43: Nice review, but worth noting that single cell RNA sequencing has been around for several decades. https://t.co/AhOSlBvrnu
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
Nice review, but worth noting that single cell RNA sequencing has been around for several decades. https://t.co/AhOSlBvrnu
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
RT @LGMartelotto: An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/8C98Et14PT
Hey @ORSsociety members looking to do some #SpatialTranscriptomics! Check out this review as an introduction to the techniques, strategies, and analyses involved in spatial sequencing. #ORSSMC #orthoresearch https://t.co/CXVS59mPFV
Thank you @MelbImmunoNet for the invitation to speak about Spatial Transcriptomic screening of tissues. For those interested in this approach @ThompsonLab, perhaps check out our Genome Medicine review https://t.co/6jqx5UumoU @vizgen_inc @10xGenomics @insitubiology #MIN2022.
RT @HostMicrobeLit: A
We will next focus on how to gain biological insights from ST data. We will start by revisiting the first study in the list to answer the question: Which spatial platforms may better suit different discovery screens or hypothesis testing? https://t.co/6ond9v5HrU
We will start with entry-level bioinformatic guidance for those seeking to employ spatial transcriptomics in their own biomedical research. This includes pre-processing, integration with existing scRNA-seq data and inference of cell-cell interactions. https://t.co/6ond9v5HrU
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @Innov_Medicine: #Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analy…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @Innov_Medicine: #Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analy…
RT @Innov_Medicine: #Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analy…
RT @Innov_Medicine: #Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analy…
RT @Innov_Medicine: #Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analy…
#Spatial #transcriptomics introduction by @roserventotormo & @DrAshHaque teams, including experimental design and analyses: @GenomeMedicine https://t.co/fQxXkCNhTw #scienceresearch #science #scRNAseq #Bioinformatics #meded https://t.co/7dueYVACQc
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/B9K25Fzz8X
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
RT @fabian_theis: Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including exper…
Really nice and detailed introduction to spatial transcriptomics by @roserventotormo & @DrAshHaque teams, including experimental design and analyses @GenomeMedicine: https://t.co/z7k5rWpWuv https://t.co/pZRuy3KRft
RT @HostMicrobeLit: A
Exciting to hear about Visium, STomics, MERScope, Xenium spatial transcriptomics tech from Edwin Hawkins’ lab at @WEHI_research at @MelbImmunoNet. If you want to learn more, perhaps read this recent review by our PhD student @Cam_Williams999 https://t.co/ZK7HosjWvq.
RT @HostMicrobeLit: A
RT @HostMicrobeLit: A
RT @HostMicrobeLit: A
A
RT @jsantoyo: An introduction to spatial transcriptomics for biomedical research. #SpatialTranscriptomics https://t.co/LTpRTjlCY8 @GenomeMe…
#genomics #ngs An introduction to spatial transcriptomics for biomedical research | Genome Medicine | Full Text https://t.co/xczMyFEYWE, see more https://t.co/qCa4CCoai6
RT @HostMicrobeLit: An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great
RT @HostMicrobeLit: An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great
RT @HostMicrobeLit: An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great
RT @HostMicrobeLit: An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great
RT @HostMicrobeLit: An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great
An introduction to spatial transcriptomics for biomedical research. New review @GenomeMedicine Looks great