Publications by authors named "Alan Cleary"

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Genome Context Viewer (GCV) version 2: enhanced visual exploration of multiple annotated genomes.
Alan M Cleary, Andrew D Farmer

Nucleic Acids Res· July 2023

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Ten simple rules for developing visualization tools in genomics.
Eloi Durant, Mathieu Rouard, Eric W Ganko, Cedric Muller, Alan M Cleary

PLoS Comput Biol· November 2022

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Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources.
Sven Redsun, Sam Hokin, Connor T Cameron, Alan M Cleary, Joel Berendzen

Methods Mol Biol· March 2022

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Araport Lives: An Updated Framework for Arabidopsis Bioinformatics.
Asher Pasha, Shabari Subramaniam, Alan Cleary, Xingguo Chen, Tanya Berardini

Plant Cell· September 2020

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Exploring Frequented Regions in Pan-Genomic Graphs.
Alan Cleary, Thiruvarangan Ramaraj, Indika Kahanda, Joann Mudge, Brendan Mumey

IEEE/ACM Trans Comput Biol Bioinform· March 2020

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A strategy for building and using a human reference pangenome.
Bastien Llamas, Giuseppe Narzisi, Valerie Schneider, Peter A Audano, Evan Biederstedt, Alan Cleary

F1000Res· October 2019

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Genome Context Viewer: visual exploration of multiple annotated genomes using microsynteny.
Alan Cleary, Andrew Farmer

Bioinformatics· May 2018

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Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family.
Sudhansu Dash, Jacqueline D Campbell, Ethalinda K S Cannon, Alan M Cleary, Wei Huang

Nucleic Acids Res· January 2016

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