Publications by authors named "Alan R Lowe"

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Spatial and temporal signatures of cell competition revealed by K-function analysis.
Nathan J Day, Jasmine Michalowska, Manasi Kelkar, Giulia Vallardi, Guillaume Charras, Alan R Lowe

Mol Biol Cell· May 2025

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AI: A transformative opportunity in cell biology.
Ambrose Carr, Jonah Cool, Theofanis Karaletsos, Donghui Li, Alan R Lowe

Mol Biol Cell· December 2024

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cellPLATO - an unsupervised method for identifying cell behaviour in heterogeneous cell trajectory data.
Michael J Shannon, Shira E Eisman, Alan R Lowe, Tyler F W Sloan, Emily M Mace

J Cell Sci· October 2024

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Self-sustaining long-term 3D epithelioid cultures reveal drivers of clonal expansion in esophageal epithelium.
Albert Herms, David Fernandez-Antoran, Maria P Alcolea, Argyro Kalogeropoulou, Ujjwal Banerjee, Alan R Lowe

Nat Genet· October 2024

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cellPLATO: an unsupervised method for identifying cell behaviour in heterogeneous cell trajectory data.
Michael J Shannon, Shira E Eisman, Alan R Lowe, Tyler Sloan, Emily M Mace

bioRxiv· November 2023

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Machine learning enhanced cell tracking.
Christopher J Soelistyo, Kristina Ulicna, Alan R Lowe

Front Bioinform· July 2023

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Convolutional Neural Networks for Classifying Chromatin Morphology in Live-Cell Imaging.
Kristina Ulicna, Laure T L Ho, Christopher J Soelistyo, Nathan J Day, Alan R Lowe

Methods Mol Biol· June 2022

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Cell-scale biophysical determinants of cell competition in epithelia.
Daniel Gradeci, Anna Bove, Giulia Vallardi, Alan R Lowe, Shiladitya Banerjee

Elife· May 2021

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Single-cell approaches to cell competition: High-throughput imaging, machine learning and simulations.
Daniel Gradeci, Anna Bove, Guillaume Charras, Alan R Lowe, Shiladitya Banerjee

Semin Cancer Biol· June 2020

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Editorial Overview: Biophysical and computational methods.
Alan R Lowe, Laura S Itzhaki

Curr Opin Struct Biol· October 2019

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Miro clusters regulate ER-mitochondria contact sites and link cristae organization to the mitochondrial transport machinery.
Souvik Modi, Guillermo López-Doménech, Elise F Halff, Christian Covill-Cooke, Davor Ivankovic, Alan R Lowe

Nat Commun· September 2019

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Context-Dependent Energetics of Loop Extensions in a Family of Tandem-Repeat Proteins.
Albert Perez-Riba, Alan R Lowe, Ewan R G Main, Laura S Itzhaki

Biophys J· June 2018

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A Liquid to Solid Phase Transition Underlying Pathological Huntingtin Exon1 Aggregation.
Thomas R Peskett, Frédérique Rau, Jonathan O'Driscoll, Rickie Patani, Alan R Lowe

Mol Cell· May 2018

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PyFolding: Open-Source Graphing, Simulation, and Analysis of the Biophysical Properties of Proteins.
Alan R Lowe, Albert Perez-Riba, Laura S Itzhaki, Ewan R G Main

Biophys J· February 2018

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Single-Molecule Imaging to Characterize the Transport Mechanism of the Nuclear Pore Complex.
Grace Jeremy, James Stevens, Alan R Lowe

Methods Mol Biol· December 2017

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Local cellular neighborhood controls proliferation in cell competition.
Anna Bove, Daniel Gradeci, Yasuyuki Fujita, Shiladitya Banerjee, Guillaume Charras, Alan R Lowe

Mol Biol Cell· November 2017

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Conformational transition of FGFR kinase activation revealed by site-specific unnatural amino acid reporter and single molecule FRET.
Louis Perdios, Alan R Lowe, Giorgio Saladino, Tom D Bunney, Nethaji Thiyagarajan

Sci Rep· January 2017

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Cyanobacteria use micro-optics to sense light direction.
Nils Schuergers, Tchern Lenn, Ronald Kampmann, Markus V Meissner, Tiago Esteves, Alan R Lowe

Elife· February 2016

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Mapping the Topography of a Protein Energy Landscape.
Richard D Hutton, James Wilkinson, Mauro Faccin, Elin M Sivertsson, Alessandro Pelizzola, Alan R Lowe

J Am Chem Soc· November 2015

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Importin-β modulates the permeability of the nuclear pore complex in a Ran-dependent manner.
Alan R Lowe, Jeffrey H Tang, Jaime Yassif, Michael Graf, William Y C Huang

Elife· March 2015

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From artificial antibodies to nanosprings: the biophysical properties of repeat proteins.
Laura S Itzhaki, Alan R Lowe

Adv Exp Med Biol· October 2012

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Selectivity mechanism of the nuclear pore complex characterized by single cargo tracking.
Alan R Lowe, Jake J Siegel, Petr Kalab, Merek Siu, Karsten Weis

Nature· September 2010

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ATPase site architecture and helicase mechanism of an archaeal MCM.
Matthew J Moreau, Adam T McGeoch, Alan R Lowe, Laura S Itzhaki, Stephen D Bell

Mol Cell· October 2007

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Rational redesign of the folding pathway of a modular protein.
Alan R Lowe, Laura S Itzhaki

Proc Natl Acad Sci U S A· February 2007

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Biophysical characterisation of the small ankyrin repeat protein myotrophin.
Alan R Lowe, Laura S Itzhaki

J Mol Biol· January 2007

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