Publications by authors named "Alexander D Johnson"

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Response of white and opaque cells to phagocytosis by macrophages suggests that opaque cells are "pre-adapted".
Matthew B Lohse, Megan E Garber, Haley Gause, Jenny Y Zhang, Anika Ramachandran, Alexander D Johnson

mSphere· December 2025

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Shared metabolism between a bacterial and fungal species that reside in the human gut.
Haley Gause, Alexander D Johnson

Proc Natl Acad Sci U S A· September 2025

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Variation in transcription regulator expression underlies differences in white-opaque switching between the SC5314 reference strain and the majority of Candida albicans clinical isolates.
Matthew B Lohse, Naomi Ziv, Alexander D Johnson

Genetics· November 2023

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Broad susceptibility of strains to 8-hydroxyquinolines and mechanisms of resistance.
Matthew B Lohse, Matthew T Laurie, Sophia Levan, Naomi Ziv, Craig L Ennis, Alexander D Johnson

mBio· August 2023

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Ancient transcriptional regulators can easily evolve new pair-wise cooperativity.
Kyle R Fowler, Fredrick Leon, Alexander D Johnson

Proc Natl Acad Sci U S A· July 2023

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Evolution of a new form of haploid-specific gene regulation appearing in a limited clade of ascomycete yeast species.
Francesca Del Frate, Megan E Garber, Alexander D Johnson

Genetics· May 2023

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Cell-type memory in a single-cell eukaryote requires the continuous presence of a specific transcription regulator.
Chien-Der Lee, Naomi Ziv, Alexander D Johnson

Proc Natl Acad Sci U S A· May 2023

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Farnesol and phosphorylation of the transcriptional regulator Efg1 affect Candida albicans white-opaque switching rates.
Lucas R Brenes, Alexander D Johnson, Matthew B Lohse

PLoS One· February 2023

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Broad sensitivity of strains to quinolones and mechanisms of resistance.
Matthew B Lohse, Matthew T Laurie, Sophia Levan, Naomi Ziv, Craig L Ennis, Alexander D Johnson

bioRxiv· February 2023

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The X chromosome from telomere to telomere: key achievements and future opportunities.
Edith Heard, Alexander D Johnson, Jan O Korbel, Charles Lee, Michael P Snyder

Fac Rev· July 2021

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Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics.
Patrick T West, Samantha L Peters, Matthew R Olm, Feiqiao B Yu, Haley Gause, Alexander D Johnson

Microbiome· June 2021

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Evolution of the complex transcription network controlling biofilm formation in species.
Eugenio Mancera, Isabel Nocedal, Stephen Hammel, Megha Gulati, Kaitlin F Mitchell, Alexander D Johnson

Elife· April 2021

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Lineage-specific selection and the evolution of virulence in the clade.
Sheena D Singh-Babak, Tomas Babak, Hunter B Fraser, Alexander D Johnson

Proc Natl Acad Sci U S A· March 2021

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A Screen for Small Molecules to Target Biofilms.
Matthew B Lohse, Craig L Ennis, Nairi Hartooni, Alexander D Johnson, Clarissa J Nobile

J Fungi (Basel)· December 2020

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An Opaque Cell-Specific Expression Program of Secreted Proteases and Transporters Allows Cell-Type Cooperation in .
Matthew B Lohse, Lucas R Brenes, Naomi Ziv, Michael B Winter, Charles S Craik, Alexander D Johnson

Genetics· October 2020

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A Set of Diverse Genes Influence the Frequency of White-Opaque Switching in .
Lucas R Brenes, Matthew B Lohse, Nairi Hartooni, Alexander D Johnson

G3 (Bethesda)· August 2020

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A Selective Serotonin Reuptake Inhibitor, a Proton Pump Inhibitor, and Two Calcium Channel Blockers Inhibit Biofilms.
Clarissa J Nobile, Craig L Ennis, Nairi Hartooni, Alexander D Johnson, Matthew B Lohse

Microorganisms· May 2020

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Combination of Antifungal Drugs and Protease Inhibitors Prevent Biofilm Formation and Disrupt Mature Biofilms.
Matthew B Lohse, Megha Gulati, Charles S Craik, Alexander D Johnson, Clarissa J Nobile

Front Microbiol· May 2020

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Corrigendum: Genetic Modification of Closely Related Candida Species.
Eugenio Mancera, Corey Frazer, Allison M Porman, Susana Ruiz-Castro, Alexander D Johnson

Front Microbiol· April 2020

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Candida albicans white and opaque cells exhibit distinct spectra of organ colonization in mouse models of infection.
Julie Takagi, Sheena D Singh-Babak, Matthew B Lohse, Chiraj K Dalal, Alexander D Johnson

PLoS One· February 2020

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Protein-coding changes preceded cis-regulatory gains in a newly evolved transcription circuit.
Candace S Britton, Trevor R Sorrells, Alexander D Johnson

Science· January 2020

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A population shift between two heritable cell types of the pathogen is based both on switching and selective proliferation.
Chiraj K Dalal, Ignacio A Zuleta, Matthew B Lohse, Rebecca E Zordan, Hana El-Samad, Alexander D Johnson

Proc Natl Acad Sci U S A· December 2019

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Genetic Modification of Closely Related Species.
Eugenio Mancera, Corey Frazer, Allison M Porman, Susana Ruiz-Castro, Alexander D Johnson

Front Microbiol· March 2019

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Evaluation of SmearOFF, maleic acid and two EDTA preparations in smear layer removal from root canal dentin.
Nidambur Vasudev Ballal, Himanshu Jain, Sheetal Rao, Alexander D Johnson, John Baeten

Acta Odontol Scand· January 2019

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Intrinsic cooperativity potentiates parallel -regulatory evolution.
Trevor R Sorrells, Amanda N Johnson, Conor J Howard, Candace S Britton, Kyle R Fowler, Alexander D Johnson

Elife· September 2018

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