Publications by authors named "Alison Cuff"

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The evolution of digital health and its continuing challenges.
Alison Cuff

BMC Digit Health· January 2023

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Correction to: Inaugural BMC Ecology and Evolution image competition: the winning images.
Jennifer L Harman, Alison L Cuff, Josef Settele, Luke M Jacobus, David A Liberles

BMC Ecol Evol· September 2021

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Inaugural BMC Ecology and Evolution image competition: the winning images.
Jennifer L Harman, Alison L Cuff, Josef Settele, Luke M Jacobus, David A Liberles

BMC Ecol Evol· August 2021

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Seventh BMC ecology image competition: the winning images.
Alison L Cuff, Michel Baguette, Simon Blanchet, Luke M Jacobus, Dominique Mazzi

BMC Ecol· August 2020

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BMC ecology image competition 2018: the winning images.
Alison L Cuff, Ying Lou, Jiang Zhigang, Michel Baguette, Simon Blanchet

BMC Ecol· March 2019

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CATH: comprehensive structural and functional annotations for genome sequences.
Ian Sillitoe, Tony E Lewis, Alison Cuff, Sayoni Das, Paul Ashford

Nucleic Acids Res· January 2015

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New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures.
Ian Sillitoe, Alison L Cuff, Benoit H Dessailly, Natalie L Dawson, Nicholas Furnham

Nucleic Acids Res· January 2013

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Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.
Tony E Lewis, Ian Sillitoe, Antonina Andreeva, Tom L Blundell, Daniel W A Buchan, Alison Cuff

Nucleic Acids Res· January 2013

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Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies.
Nicholas Furnham, Ian Sillitoe, Gemma L Holliday, Alison L Cuff, Roman A Laskowski

PLoS Comput Biol· June 2012

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FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.
Nicholas Furnham, Ian Sillitoe, Gemma L Holliday, Alison L Cuff, Syed A Rahman

Nucleic Acids Res· January 2012

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Extending CATH: increasing coverage of the protein structure universe and linking structure with function.
Alison L Cuff, Ian Sillitoe, Tony Lewis, Andrew B Clegg, Robert Rentzsch

Nucleic Acids Res· January 2011

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Detailed analysis of function divergence in a large and diverse domain superfamily: toward a refined protocol of function classification.
Benoit H Dessailly, Oliver C Redfern, Alison L Cuff, Christine A Orengo

Structure· November 2010

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The evolution of protein functions and networks: a family-centric approach.
Benoît H Dessailly, Adam J Reid, Corin Yeats, Jonathan G Lees, Alison Cuff

Biochem Soc Trans· August 2009

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The CATH hierarchy revisited-structural divergence in domain superfamilies and the continuity of fold space.
Alison Cuff, Oliver C Redfern, Lesley Greene, Ian Sillitoe, Tony Lewis

Structure· August 2009

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Exploiting structural classifications for function prediction: towards a domain grammar for protein function.
Benoît H Dessailly, Oliver C Redfern, Alison Cuff, Christine A Orengo

Curr Opin Struct Biol· June 2009

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The CATH classification revisited--architectures reviewed and new ways to characterize structural divergence in superfamilies.
Alison L Cuff, Ian Sillitoe, Tony Lewis, Oliver C Redfern, Richard Garratt

Nucleic Acids Res· January 2009

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The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution.
Lesley H Greene, Tony E Lewis, Sarah Addou, Alison Cuff, Tim Dallman

Nucleic Acids Res· January 2007

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Analysing the ability to retain sidechain hydrogen-bonds in mutant proteins.
Alison L Cuff, Robert W Janes, Andrew C R Martin

Bioinformatics· June 2006

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Overcoming protein denaturation caused by irradiation in a high-flux synchrotron radiation circular dichroism beamline.
Robert W Janes, Alison L Cuff

J Synchrotron Radiat· July 2005

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Analysis of void volumes in proteins and application to stability of the p53 tumour suppressor protein.
Alison L Cuff, Andrew C R Martin

J Mol Biol· December 2004

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Integrating mutation data and structural analysis of the TP53 tumor-suppressor protein.
Andrew C R Martin, Angelo M Facchiano, Alison L Cuff, Tina Hernandez-Boussard, Magali Olivier

Hum Mutat· February 2002

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