Publications by authors named "Amanda M Casto"

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SARS-CoV-2 Diversity and Transmission on a University Campus across Two Academic Years during the Pandemic.
Amanda M Casto, Miguel I Paredes, Julia C Bennett, Kyle G Luiten, Peter D Han

Clin Chem· January 2025

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Viral Genomic Variation and the Severity of Genital Herpes Simplex Virus-2 Infection as Quantified by Shedding Rate: A Viral Genome-Wide Association Study.
Amanda M Casto, Hoseung Song, Hong Xie, Stacy Selke, Pavitra Roychoudhury

J Infect Dis· December 2024

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Clinical and Genomic Epidemiology of Coxsackievirus A21 and Enterovirus D68 in Homeless Shelters, King County, Washington, USA, 2019-2021.
Sarah N Cox, Amanda M Casto, Nicholas M Franko, Eric J Chow, Peter D Han

Emerg Infect Dis· November 2024

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Remote surveillance and detection of SARS-CoV-2 transmission among household members in King County, Washington.
Anne Emanuels, Amanda M Casto, Jessica Heimonen, Jessica O'Hanlon, Eric J Chow

BMC Infect Dis· March 2024

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Results from a test-and-treat study for influenza among residents of homeless shelters in King County, WA: A stepped-wedge cluster-randomized trial.
Julia H Rogers, Amanda M Casto, Gift Nwanne, Amy C Link, Miguel A Martinez

Influenza Other Respir Viruses· January 2023

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The clinical and genomic epidemiology of seasonal human coronaviruses in congregate homeless shelter settings: A repeated cross-sectional study.
Eric J Chow, Amanda M Casto, Julia H Rogers, Pavitra Roychoudhury, Peter D Han

Lancet Reg Health Am· November 2022

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Human Parainfluenza Virus in Homeless Shelters before and during the COVID-19 Pandemic, Washington, USA.
Eric J Chow, Amanda M Casto, Reigran Sampoleo, Margaret G Mills, Peter D Han

Emerg Infect Dis· November 2022

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The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington.
Eric J Chow, Amanda M Casto, Pavitra Roychoudhury, Peter D Han, Hong Xie

J Infect Dis· October 2022

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Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus.
Ana A Weil, Kyle G Luiten, Amanda M Casto, Julia C Bennett, Jessica O'Hanlon

Nat Commun· September 2022

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Phylogenomics of Severe Acute Respiratory Syndrome Coronavirus 2 in Emergency Shelters for People Experiencing Homelessness.
Amanda M Casto, Julia H Rogers, Amy C Link, Michael Boeckh, Michael L Jackson

J Infect Dis· August 2022

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Diagnosis of infectious diseases in immunocompromised hosts using metagenomic next generation sequencing-based diagnostics.
Amanda M Casto, David N Fredricks, Joshua A Hill

Blood Rev· May 2022

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Host-pathogen dynamics in longitudinal clinical specimens from patients with COVID-19.
Michelle J Lin, Victoria M Rachleff, Hong Xie, Lasata Shrestha, Nicole A P Lieberman, Amanda M Casto

Sci Rep· April 2022

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Treponema pallidum genome sequencing from six continents reveals variability in vaccine candidate genes and dominance of Nichols clade strains in Madagascar.
Nicole A P Lieberman, Michelle J Lin, Hong Xie, Lasata Shrestha, Tien Nguyen, Amanda M Casto

PLoS Negl Trop Dis· December 2021

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SARS-CoV-2 Epidemiology on a Public University Campus in Washington State.
Ana A Weil, Sarah L Sohlberg, Jessica A O'Hanlon, Amanda M Casto, Anne W Emanuels

Open Forum Infect Dis· November 2021

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Genetic variants associated with cytomegalovirus infection after allogeneic hematopoietic cell transplantation.
Amanda M Casto, Sachiko Seo, David M Levine, Barry E Storer, Xinyuan Dong

Blood· October 2021

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Evaluating Specimen Quality and Results from a Community-Wide, Home-Based Respiratory Surveillance Study.
Ashley E Kim, Elisabeth Brandstetter, Naomi Wilcox, Jessica Heimonen, Chelsey Graham, Amanda M Casto

J Clin Microbiol· April 2021

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Dynamics of Neutralizing Antibody Titers in the Months After Severe Acute Respiratory Syndrome Coronavirus 2 Infection.
Katharine H D Crawford, Adam S Dingens, Rachel Eguia, Caitlin R Wolf, Naomi Wilcox, Amanda M Casto

J Infect Dis· February 2021

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Herpes Simplex Virus Mistyping due to HSV-1 × HSV-2 Interspecies Recombination in Viral Gene Encoding Glycoprotein B.
Amanda M Casto, Meei-Li W Huang, Hong Xie, Keith R Jerome, Anna Wald

Viruses· August 2020

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Evaluation of Genotypic Antiviral Resistance Testing as an Alternative to Phenotypic Testing in a Patient with DOCK8 Deficiency and Severe HSV-1 Disease.
Amanda M Casto, Sean C Stout, Rangaraj Selvarangan, Alexandra F Freeman, Brandon D Newell

J Infect Dis· June 2020

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Comparative Performance of SARS-CoV-2 Detection Assays Using Seven Different Primer-Probe Sets and One Assay Kit.
Arun K Nalla, Amanda M Casto, Meei-Li W Huang, Garrett A Perchetti, Reigran Sampoleo

J Clin Microbiol· May 2020

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Large, Stable, Contemporary Interspecies Recombination Events in Circulating Human Herpes Simplex Viruses.
Amanda M Casto, Pavitra Roychoudhury, Hong Xie, Stacy Selke, Garrett A Perchetti

J Infect Dis· March 2020

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Comparative Performance of SARS-CoV-2 Detection Assays using Seven Different Primer/Probe Sets and One Assay Kit.
Amanda M Casto, Meei-Li Huang, Arun Nalla, Garrett A Perchetti, Reigran Sampoleo

medRxiv· March 2020

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High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature.
Vikas Peddu, Benjamin T Bradley, Amanda M Casto, Raj Shree, Brice G Colbert

Sci Rep· February 2020

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Prospective, Real-time Metagenomic Sequencing During Norovirus Outbreak Reveals Discrete Transmission Clusters.
Amanda M Casto, Amanda L Adler, Negar Makhsous, Kristen Crawford, Xuan Qin

Clin Infect Dis· August 2019

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The role of selection in shaping diversity of natural M. tuberculosis populations.
Caitlin S Pepperell, Amanda M Casto, Andrew Kitchen, Julie M Granka, Omar E Cornejo

PLoS Pathog· August 2013

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