Publications by authors named "Ana Pombo"

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An integrated view of the structure and function of the human 4D nucleome.
Job Dekker, Betul Akgol Oksuz, Yang Zhang, Ye Wang, Miriam K Minsk, Ana Pombo

Nature· December 2025

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Cryosectioning-enhanced super-resolution microscopy for single-protein imaging across cells and tissues.
Johannes Stein, Maria Ericsson, Michel Nofal, Lorenzo Magni, Sarah Aufmkolk, Ana Pombo

Proc Natl Acad Sci U S A· August 2025

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Specialised super-enhancer networks in stem cells and neurons.
Izabela Harabula, Liam Speakman, Francesco Musella, Luca Forillo, Luna Zea-Redondo, Ana Pombo

bioRxiv· August 2025

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Extensive folding variability between homologous chromosomes in mammalian cells.
Ibai Irastorza-Azcarate, Alexander Kukalev, Rieke Kempfer, Christoph J Thieme, Guido Mastrobuoni, Ana Pombo

Mol Syst Biol· July 2025

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Oncogene Silencing via ecDNA Micronucleation.
Lotte Brückner, Robin Xu, Jun Tang, Alexander Herrmann, Ivy Tsz-Lo Wong, Ana Pombo

bioRxiv· April 2025

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Cryosectioning-enhanced super-resolution microscopy for single-protein imaging across cells and tissues.
Johannes Stein, Maria Ericsson, Michel Nofal, Lorenzo Magni, Sarah Aufmkolk, Ana Pombo

bioRxiv· February 2025

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An integrated view of the structure and function of the human 4D nucleome.

bioRxiv· October 2024

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Extensive folding variability between homologous chromosomes in mammalian cells.
Ibai Irastorza-Azcarate, Alexander Kukalev, Rieke Kempfer, Christoph J Thieme, Guido Mastrobuoni, Ana Pombo

bioRxiv· May 2024

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A single dose of cocaine rewires the 3D genome structure of midbrain dopamine neurons.
Dominik Szabó, Vedran Franke, Simona Bianco, Mykhailo Y Batiuk, Eleanor J Paul, Ana Pombo

bioRxiv· May 2024

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SRRM2 splicing factor modulates cell fate in early development.
Silvia Carvalho, Luna Zea-Redondo, Tsz Ching Chloe Tang, Philipp Stachel-Braum, Duncan Miller, Ana Pombo

Biol Open· April 2024

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Epigenetic regulatory layers in the 3D nucleus.
Andréa Willemin, Dominik Szabó, Ana Pombo

Mol Cell· February 2024

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Temporal and spatial variability in the isotopic composition of sea urchins along Portuguese coast.
A Cristina Rocha, Marta Ressurreição, Alexandra Baeta, Helena Veríssimo, Bárbara Camarão, Ana Pombo

Mar Environ Res· November 2023

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Use of the gonadal tissue of the sea urchin Paracentrotus lividus as a target for environmental contamination by trace metals.
Monique S Sarly, Carmen A Pedro, Catarina S Bruno, Andreia Raposo, Helenita C Quadros, Ana Pombo

Environ Sci Pollut Res Int· August 2023

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Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C.
Robert A Beagrie, Christoph J Thieme, Carlo Annunziatella, Catherine Baugher, Yingnan Zhang, Ana Pombo

Nat Methods· July 2023

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Comparison of the Efficiency of Different Eradication Treatments to Minimize the Impacts Caused by the Invasive Tunicate in Mussel Aquaculture.
Pedro M Santos, Eliana Venâncio, Maria Ana Dionísio, Joshua Heumüller, Paula Chainho, Ana Pombo

Animals (Basel)· May 2023

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Evaluating sea cucumbers as extractive species for benthic bioremediation in mussel farms.
Luca Grosso, Massimo Rampacci, Davide Pensa, Alessandra Fianchini, Esin Batır, Ana Pombo

Sci Rep· January 2023

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A noncoding single-nucleotide polymorphism at 8q24 drives -mutant glioma formation.
Connor Yanchus, Kristen L Drucker, Thomas M Kollmeyer, Ricky Tsai, Warren Winick-Ng, Ana Pombo

Science· October 2022

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Reproductive Biology of the Sea Cucumber (Echinodermata: Holothuroidea).
Eliana Venâncio, Pedro M Félix, Ana C Brito, Francisco Azevedo E Silva, Tomás Simões, Ana Pombo

Biology (Basel)· April 2022

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Altered nuclear architecture in blood cells from Huntington's disease patients.
Inês J de Castro, Brian Toner, Sheila Q Xie, James Swingland, Angela Hodges, Ana Pombo

Neurol Sci· January 2022

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Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos.
Alison C McGarvey, Wolfgang Kopp, Dubravka Vučićević, Kenny Mattonet, Rieke Kempfer, Ana Pombo

Cell Genom· January 2022

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Potential use of macroalgae Gracilaria gracilis in diets for European seabass (Dicentrarchus labrax): Health benefits from a sustainable source.
Ricardo Passos, Ana Patrícia Correia, Damiana Pires, Pedro Pires, Inês Ferreira, Ana Pombo

Fish Shellfish Immunol· December 2021

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Cell-type specialization is encoded by specific chromatin topologies.
Warren Winick-Ng, Alexander Kukalev, Izabela Harabula, Luna Zea-Redondo, Dominik Szabó, Ana Pombo

Nature· November 2021

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GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data.
Julia Markowski, Rieke Kempfer, Alexander Kukalev, Ibai Irastorza-Azcarate, Gesa Loof, Ana Pombo

Bioinformatics· October 2021

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Publisher Correction: Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin.
Luca Fiorillo, Francesco Musella, Mattia Conte, Rieke Kempfer, Andrea M Chiariello, Ana Pombo

Nat Methods· October 2021

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Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin.
Luca Fiorillo, Francesco Musella, Mattia Conte, Rieke Kempfer, Andrea M Chiariello, Ana Pombo

Nat Methods· May 2021

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