Publications by authors named "Andrew Box"

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Identifying dynamical persistent biomarker structures for rare events using modern integrative machine learning approach.
Sreejata Dutta, Andrew C Box, Yanming Li, Mihaela E Sardiu

Proteomics· November 2023

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Pathologic polyglutamine aggregation begins with a self-poisoning polymer crystal.
Tej Kandola, Shriram Venkatesan, Jiahui Zhang, Brooklyn T Lerbakken, Alex Von Schulze, Andrew C Box

Elife· November 2023

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Pathologic polyglutamine aggregation begins with a self-poisoning polymer crystal.
Tej Kandola, Shriram Venkatesan, Jiahui Zhang, Brooklyn Lerbakken, Alex Von Schulze, Andrew Box

bioRxiv· July 2023

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Cell Sorter Cleaning Practices and Their Impact on Instrument Sterility.
Andrew Box, Laura Holmes, Monica DeLay, Dave Adams, Alan Bergeron

J Biomol Tech· April 2022

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Identification of rare, transient post-mitotic cell states that are induced by injury and required for whole-body regeneration in Schmidtea mediterranea.
Blair W Benham-Pyle, Carolyn E Brewster, Aubrey M Kent, Frederick G Mann, Shiyuan Chen, Andrew C Box

Nat Cell Biol· September 2021

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Tumor-initiating stem cell shapes its microenvironment into an immunosuppressive barrier and pro-tumorigenic niche.
Xi He, Sarah E Smith, Shiyuan Chen, Hua Li, Di Wu, Andrew Box

Cell Rep· September 2021

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Image3C, a multimodal image-based and label-independent integrative method for single-cell analysis.
Alice Accorsi, Andrew C Box, Robert Peuß, Christopher Wood, Alejandro Sánchez Alvarado

Elife· July 2021

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Identification of stem cells from large cell populations with topological scoring.
Mihaela E Sardiu, Andrew C Box, Jeffrey S Haug, Michael P Washburn

Mol Omics· February 2021

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Author Correction: Insulin resistance in cavefish as an adaptation to a nutrient-limited environment.
Misty R Riddle, Ariel C Aspiras, Karin Gaudenz, Robert Peuß, Jenny Y Sung, Andrew C Box

Nature· December 2020

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Adaptation to low parasite abundance affects immune investment and immunopathological responses of cavefish.
Robert Peuß, Andrew C Box, Shiyuan Chen, Yongfu Wang, Dai Tsuchiya

Nat Ecol Evol· October 2020

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Evaluating the Effects of Cell Sorting on Gene Expression.
Andrew Box, Monica DeLay, Scott Tighe, Sridar V Chittur, Alan Bergeron

J Biomol Tech· September 2020

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Evaluating the Effects of Cell Sorting on Gene Expression.
Andrew Box, Monica DeLay, Scott Tighe, Sridar V Chittur, Alan Bergeron

J Biomol Tech· June 2020

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Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry.
Shriram Venkatesan, Tejbir S Kandola, Alejandro Rodríguez-Gama, Andrew Box, Randal Halfmann

J Vis Exp· July 2019

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Quantifying Nucleation In Vivo Reveals the Physical Basis of Prion-like Phase Behavior.
Tarique Khan, Tejbir S Kandola, Jianzheng Wu, Shriram Venkatesan, Ellen Ketter, Andrew Box

Mol Cell· February 2019

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A Population of Navigator Neurons Is Essential for Olfactory Map Formation during the Critical Period.
Yunming Wu, Limei Ma, Kyle Duyck, Carter C Long, Andrea Moran, Andrew Box

Neuron· December 2018

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Quantifying Nucleation In Vivo Reveals the Physical Basis of Prion-like Phase Behavior.
Tarique Khan, Tejbir S Kandola, Jianzheng Wu, Shriram Venkatesan, Ellen Ketter, Andrew Box

Mol Cell· July 2018

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Prospectively Isolated Tetraspanin Neoblasts Are Adult Pluripotent Stem Cells Underlying Planaria Regeneration.
An Zeng, Hua Li, Longhua Guo, Xin Gao, Sean McKinney, Andrew Box

Cell· June 2018

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Retinoid-Sensitive Epigenetic Regulation of the Hoxb Cluster Maintains Normal Hematopoiesis and Inhibits Leukemogenesis.
Pengxu Qian, Bony De Kumar, Xi C He, Christof Nolte, Madelaine Gogol, Andrew Box

Cell Stem Cell· May 2018

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Insulin resistance in cavefish as an adaptation to a nutrient-limited environment.
Misty R Riddle, Ariel C Aspiras, Karin Gaudenz, Robert Peuß, Jenny Y Sung, Andrew C Box

Nature· March 2018

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Using Fluorescent Reporters in Conjunction with Cytometry and Statistics to Assess Nuclear Accumulation of Ribosomal Proteins.
Dong-Hwan Kim, Andrew C Box, Hua Li, Jennifer L Gerton

Methods Mol Biol· January 2018

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Single-cell transcriptome analysis of avian neural crest migration reveals signatures of invasion and molecular transitions.
Jason A Morrison, Rebecca McLennan, Lauren A Wolfe, Madelaine M Gogol, Samuel Meier, Andrew C Box

Elife· December 2017

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Multiplexed Cell-Based Sensors for Assessing the Impact of Engineered Systems and Methods on Cell Health.
Sarvesh Varma, Anna Fendyur, Andrew Box, Joel Voldman

Anal Chem· April 2017

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Transcriptome analysis of tetraploid cells identifies cyclin D2 as a facilitator of adaptation to genome doubling in the presence of p53.
Tamara A Potapova, Christopher W Seidel, Andrew C Box, Giulia Rancati, Rong Li

Mol Biol Cell· October 2016

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Karyotyping human and mouse cells using probes from single-sorted chromosomes and open source software.
Tamara A Potapova, Jay R Unruh, Andrew C Box, William D Bradford, Christopher W Seidel

Biotechniques· December 2015

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Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis.
Kaiwei Liang, Ashley R Woodfin, Brian D Slaughter, Jay R Unruh, Andrew C Box

Mol Cell· November 2015

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