Publications by authors named "Andrew D Garst"

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Integrating CRISPR-Enabled Trackable Genome Engineering and Transcriptomic Analysis of Global Regulators for Antibiotic Resistance Selection and Identification in Escherichia coli.
Cong Chen, Alaksh Choudhury, Shuanghong Zhang, Andrew D Garst, Xin Song

mSystems· April 2020

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Small molecule regulated sgRNAs enable control of genome editing in E. coli by Cas9.
Roman S Iwasaki, Bagdeser A Ozdilek, Andrew D Garst, Alaksh Choudhury, Robert T Batey

Nat Commun· March 2020

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Multiplex navigation of global regulatory networks (MINR) in yeast for improved ethanol tolerance and production.
Rongming Liu, Liya Liang, Alaksh Choudhury, Andrew D Garst, Carrie A Eckert

Metab Eng· January 2019

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Genomic Deoxyxylulose Phosphate Reductoisomerase (DXR) Mutations Conferring Resistance to the Antimalarial Drug Fosmidomycin in E. coli.
Gur Pines, Eun Joong Oh, Marcelo C Bassalo, Alaksh Choudhury, Andrew D Garst

ACS Synth Biol· December 2018

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Deep scanning lysine metabolism in .
Marcelo C Bassalo, Andrew D Garst, Alaksh Choudhury, William C Grau, Eun J Oh

Mol Syst Biol· November 2018

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Directed combinatorial mutagenesis of Escherichia coli for complex phenotype engineering.
Rongming Liu, Liya Liang, Andrew D Garst, Alaksh Choudhury, Violeta Sànchez I Nogué

Metab Eng· May 2018

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Iterative genome editing of Escherichia coli for 3-hydroxypropionic acid production.
Rongming Liu, Liya Liang, Alaksh Choudhury, Marcelo C Bassalo, Andrew D Garst

Metab Eng· May 2018

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CRISPR EnAbled Trackable genome Engineering for isopropanol production in Escherichia coli.
Liya Liang, Rongming Liu, Andrew D Garst, Thomas Lee, Violeta Sànchez I Nogué

Metab Eng· May 2017

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Genome-wide mapping of mutations at single-nucleotide resolution for protein, metabolic and genome engineering.
Andrew D Garst, Marcelo C Bassalo, Gur Pines, Sean A Lynch, Andrea L Halweg-Edwards

Nat Biotechnol· January 2017

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Rapid and Efficient One-Step Metabolic Pathway Integration in E. coli.
Marcelo C Bassalo, Andrew D Garst, Andrea L Halweg-Edwards, William C Grau, Dylan W Domaille

ACS Synth Biol· July 2016

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Genome-Wide Tuning of Protein Expression Levels to Rapidly Engineer Microbial Traits.
Emily F Freed, James D Winkler, Sophie J Weiss, Andrew D Garst, Vivek K Mutalik

ACS Synth Biol· November 2015

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The emergence of commodity-scale genetic manipulation.
Andrea L Halweg-Edwards, William C Grau, James D Winkler, Andrew D Garst, Ryan T Gill

Curr Opin Chem Biol· October 2015

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Multiplexed tracking of combinatorial genomic mutations in engineered cell populations.
Ramsey I Zeitoun, Andrew D Garst, George D Degen, Gur Pines, Thomas J Mansell

Nat Biotechnol· June 2015

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Codon compression algorithms for saturation mutagenesis.
Gur Pines, Assaf Pines, Andrew D Garst, Ramsey I Zeitoun, Sean A Lynch

ACS Synth Biol· May 2015

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Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices.
Pablo Ceres, Andrew D Garst, Joan G Marcano-Velázquez, Robert T Batey

ACS Synth Biol· August 2013

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Single-molecule studies of the lysine riboswitch reveal effector-dependent conformational dynamics of the aptamer domain.
Larry R Fiegland, Andrew D Garst, Robert T Batey, David J Nesbitt

Biochemistry· November 2012

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Insights into the regulatory landscape of the lysine riboswitch.
Andrew D Garst, Ely B Porter, Robert T Batey

J Mol Biol· October 2012

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Riboswitches: structures and mechanisms.
Andrew D Garst, Andrea L Edwards, Robert T Batey

Cold Spring Harb Perspect Biol· June 2011

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Strategies in RNA crystallography.
Francis E Reyes, Andrew D Garst, Robert T Batey

Methods Enzymol· January 2011

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Discrimination between closely related cellular metabolites by the SAM-I riboswitch.
Rebecca K Montange, Estefanía Mondragón, Daria van Tyne, Andrew D Garst, Pablo Ceres

J Mol Biol· February 2010

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A switch in time: detailing the life of a riboswitch.
Andrew D Garst, Robert T Batey

Biochim Biophys Acta· January 2010

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Determining structures of RNA aptamers and riboswitches by X-ray crystallography.
Andrea L Edwards, Andrew D Garst, Robert T Batey

Methods Mol Biol· May 2009

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Crystal structure of the lysine riboswitch regulatory mRNA element.
Andrew D Garst, Annie Héroux, Robert P Rambo, Robert T Batey

J Biol Chem· August 2008

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