Publications by authors named "Andy Pang"

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Genomic map of the functionally extinct northern white rhinoceros ().
Gaojianyong Wang, Marisa L Korody, Björn Brändl, Camilo Jose Hernandez-Toro, Christian Rohrandt, Andy Wing Chun Pang

Proc Natl Acad Sci U S A· May 2025

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Optical genome mapping enables accurate testing of large repeat expansions.
Bart van der Sanden, Kornelia Neveling, Syukri Shukor, Michael D Gallagher, Joyce Lee, Andy Wing Chun Pang

Genome Res· April 2025

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Breakage fusion bridge cycles drive high oncogene number with moderate intratumoural heterogeneity.
Siavash Raeisi Dehkordi, Ivy Tsz-Lo Wong, Jing Ni, Jens Luebeck, Kaiyuan Zhu, Andy Wing Chun Pang

Nat Commun· February 2025

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OMKar: optical map based automated karyotyping of genomes to identify constitutional abnormalities.
Siavash Raeisi Dehkordi, Zhaoyang Jia, Joey Estabrook, Jen Hauenstein, Neil Miller, Andy Wing Chun Pang

medRxiv· February 2025

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Reconstruction of the human amylase locus reveals ancient duplications seeding modern-day variation.
Feyza Yilmaz, Charikleia Karageorgiou, Kwondo Kim, Petar Pajic, Kendra Scheer, Andy Pang

Science· November 2024

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Optical Genome Mapping for Applications in Repeat Expansion Disorders.
Bart van der Sanden, Kornelia Neveling, Andy Wing Chun Pang, Syukri Shukor, Michael D Gallagher

Curr Protoc· July 2024

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Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome.
Daniall Masood, Luyao Ren, Cu Nguyen, Francesco G Brundu, Lily Zheng, Andy Pang

Genome Biol· June 2024

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Detection of Genomic Structural Variations Associated with Drug Sensitivity and Resistance in Acute Leukemia.
Darren Finlay, Rabi Murad, Karl Hong, Joyce Lee, Andy Wing Chun Pang

Cancers (Basel)· January 2024

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Analytic Validation of Optical Genome Mapping in Hematological Malignancies.
Andy W C Pang, Karena Kosco, Nikhil S Sahajpal, Arthi Sridhar, Jen Hauenstein

Biomedicines· December 2023

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Breakage fusion bridge cycles drive high oncogene copy number, but not intratumoral genetic heterogeneity or rapid cancer genome change.
Siavash Raeisi Dehkordi, Ivy Tsz-Lo Wong, Jing Ni, Jens Luebeck, Kaiyuan Zhu, Andy Wing Chun Pang

bioRxiv· December 2023

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Comparative Benchmarking of Optical Genome Mapping and Chromosomal Microarray Reveals High Technological Concordance in CNV Identification and Additional Structural Variant Refinement.
Hayk Barseghyan, Andy Wing Chun Pang, Benjamin Clifford, Moises A Serrano, Alka Chaubey

Genes (Basel)· September 2023

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Optical Genome Mapping: Integrating Structural Variations for Precise Homologous Recombination Deficiency Score Calculation.
Nikhil Shri Sahajpal, Ashis K Mondal, Ashutosh Vashisht, Harmanpreet Singh, Andy Wing Chun Pang

Genes (Basel)· August 2023

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Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies.
Keyur Talsania, Tsai-Wei Shen, Xiongfong Chen, Erich Jaeger, Zhipan Li, Andy Wing Chun Pang

Genome Biol· December 2022

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A Chromosome-Length Assembly of the Hawaiian Monk Seal (): A History of "Genetic Purging" and Genomic Stability.
David W Mohr, Stephen J Gaughran, Justin Paschall, Ahmed Naguib, Andy Wing Chun Pang

Genes (Basel)· July 2022

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A high-quality bonobo genome refines the analysis of hominid evolution.
Yafei Mao, Claudia R Catacchio, LaDeana W Hillier, David Porubsky, Ruiyang Li, Andy W C Pang

Nature· June 2021

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Identification of Somatic Structural Variants in Solid Tumors by Optical Genome Mapping.
David Y Goldrich, Brandon LaBarge, Scott Chartrand, Lijun Zhang, Henry B Sadowski, Andy Wing Chun Pang

J Pers Med· February 2021

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Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle.
Wai Yee Low, Rick Tearle, Ruijie Liu, Sergey Koren, Arang Rhie, Andy W C Pang

Nat Commun· April 2020

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Multi-platform discovery of haplotype-resolved structural variation in human genomes.
Mark J P Chaisson, Ashley D Sanders, Xuefang Zhao, Ankit Malhotra, David Porubsky, Andy W C Pang

Nat Commun· April 2019

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Genomic inversions and GOLGA core duplicons underlie disease instability at the 15q25 locus.
Flavia A M Maggiolini, Stuart Cantsilieris, Pietro D'Addabbo, Michele Manganelli, Bradley P Coe, Andy Wing Chun Pang

PLoS Genet· March 2019

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Author Correction: The axolotl genome and the evolution of key tissue formation regulators.
Sergej Nowoshilow, Siegfried Schloissnig, Ji-Feng Fei, Andreas Dahl, Andy W C Pang

Nature· July 2018

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High-resolution comparative analysis of great ape genomes.
Zev N Kronenberg, Ian T Fiddes, David Gordon, Shwetha Murali, Stuart Cantsilieris, Andy Wing Chun Pang

Science· June 2018

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The axolotl genome and the evolution of key tissue formation regulators.
Sergej Nowoshilow, Siegfried Schloissnig, Ji-Feng Fei, Andreas Dahl, Andy W C Pang

Nature· February 2018

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Delivery of gene targeting siRNAs to breast cancer cells using a multifunctional peptide complex that promotes both targeted delivery and endosomal release.
Jeffrey D Bjorge, Andy Pang, Donald J Fujita

PLoS One· October 2017

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Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications.
Matthias H Weissensteiner, Andy W C Pang, Ignas Bunikis, Ida Höijer, Olga Vinnere-Petterson

Genome Res· May 2017

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Whole-genome mutational burden analysis of three pluripotency induction methods.
Kunal Bhutani, Kristopher L Nazor, Roy Williams, Ha Tran, Heng Dai, Andy W C Pang

Nat Commun· February 2016

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