Publications by authors named "Anton A Polyansky"

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Coding relationship links RNA G-quadruplexes and protein RGG motifs in RNA-binding protein autoregulation.
Marlene Adlhart, Daniel Hoffmann, Anton A Polyansky, Bojan Žagrović

Proc Natl Acad Sci U S A· January 2025

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Driving forces behind phase separation of the carboxy-terminal domain of RNA polymerase II.
David Flores-Solis, Irina P Lushpinskaia, Anton A Polyansky, Arya Changiarath, Marc Boehning

Nat Commun· September 2023

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Protein compactness and interaction valency define the architecture of a biomolecular condensate across scales.
Anton A Polyansky, Laura D Gallego, Roman G Efremov, Alwin Köhler, Bojan Zagrovic

Elife· July 2023

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On a mechanistic impact of transmembrane tetramerization in the pathological activation of RTKs.
Anton A Polyansky, Roman G Efremov

Comput Struct Biotechnol J· April 2023

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Interaction preferences between protein side chains and key epigenetic modifications 5-methylcytosine, 5-hydroxymethycytosine and N-methyladenine.
Matea Hajnic, Santiago Alonso-Gil, Anton A Polyansky, Anita de Ruiter, Bojan Zagrovic

Sci Rep· November 2022

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FIBCD1 is an endocytic GAG receptor associated with a novel neurodevelopmental disorder.
Christopher W Fell, Astrid Hagelkruys, Ana Cicvaric, Marion Horrer, Lucy Liu, Anton A Polyansky

EMBO Mol Med· September 2022

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A Uniquely Stable Trimeric Model of SARS-CoV-2 Spike Transmembrane Domain.
Elena T Aliper, Nikolay A Krylov, Dmitry E Nolde, Anton A Polyansky, Roman G Efremov

Int J Mol Sci· August 2022

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Compositional complementarity between genomic RNA and coat proteins in positive-sense single-stranded RNA viruses.
Marlene Adlhart, Florian Poetsch, Mario Hlevnjak, Megan Hoogmoed, Anton A Polyansky

Nucleic Acids Res· April 2022

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Direct interplay between stereochemistry and conformational preferences in aminoacylated oligoribonucleotides.
Anton A Polyansky, Mathias Kreuter, John D Sutherland, Bojan Zagrovic

Nucleic Acids Res· December 2019

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Atomistic mechanism of the constitutive activation of PDGFRA via its transmembrane domain.
Anton A Polyansky, Eduard V Bocharov, Amélie I Velghe, Andrey S Kuznetsov, Olga V Bocharova

Biochim Biophys Acta Gen Subj· January 2019

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RNA-protein interactions in an unstructured context.
Bojan Zagrovic, Lukas Bartonek, Anton A Polyansky

FEBS Lett· September 2018

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Self-Consistent Framework Connecting Experimental Proxies of Protein Dynamics with Configurational Entropy.
Markus Fleck, Anton A Polyansky, Bojan Zagrovic

J Chem Theory Comput· July 2018

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Dependence of Binding Free Energies between RNA Nucleobases and Protein Side Chains on Local Dielectric Properties.
Anita de Ruiter, Anton A Polyansky, Bojan Zagrovic

J Chem Theory Comput· September 2017

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A novel non-canonical PIP-box mediates PARG interaction with PCNA.
Tanja Kaufmann, Irina Grishkovskaya, Anton A Polyansky, Sebastian Kostrhon, Eva Kukolj

Nucleic Acids Res· September 2017

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Fuento: functional enrichment for bioinformatics.
David Weichselbaum, Bojan Zagrovic, Anton A Polyansky

Bioinformatics· August 2017

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The Conformation of the Epidermal Growth Factor Receptor Transmembrane Domain Dimer Dynamically Adapts to the Local Membrane Environment.
Eduard V Bocharov, Pavel E Bragin, Konstantin V Pavlov, Olga V Bocharova, Konstantin S Mineev, Anton A Polyansky

Biochemistry· March 2017

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Structural mechanism for the recognition and ubiquitination of a single nucleosome residue by Rad6-Bre1.
Laura D Gallego, Medini Ghodgaonkar Steger, Anton A Polyansky, Tobias Schubert, Bojan Zagrovic

Proc Natl Acad Sci U S A· September 2016

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Inosine Nucleobase Acts as Guanine in Interactions with Protein Side Chains.
Matea Hajnic, Anita de Ruiter, Anton A Polyansky, Bojan Zagrovic

J Am Chem Soc· May 2016

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The evolutionarily conserved transcription factor PRDM12 controls sensory neuron development and pain perception.
Vanja Nagy, Tiffany Cole, Claude Van Campenhout, Thang M Khoung, Calvin Leung, Anton A Polyansky

Cell Cycle· April 2016

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PARENT: A Parallel Software Suite for the Calculation of Configurational Entropy in Biomolecular Systems.
Markus Fleck, Anton A Polyansky, Bojan Zagrovic

J Chem Theory Comput· April 2016

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Adaptable Lipid Matrix Promotes Protein-Protein Association in Membranes.
Andrey S Kuznetsov, Anton A Polyansky, Markus Fleck, Pavel E Volynsky, Roman G Efremov

J Chem Theory Comput· September 2015

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The structure and regulation of human muscle α-actinin.
Euripedes de Almeida Ribeiro, Nikos Pinotsis, Andrea Ghisleni, Anita Salmazo, Petr V Konarev, Anton A Polyansky

Cell· December 2014

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On the Contribution of Protein Spatial Organization to the Physicochemical Interconnection between Proteins and Their Cognate mRNAs.
Andreas Beier, Bojan Zagrovic, Anton A Polyansky

Life (Basel)· November 2014

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Analogue encoding of physicochemical properties of proteins in their cognate messenger RNAs.
Anton A Polyansky, Mario Hlevnjak, Bojan Zagrovic

Nat Commun· June 2014

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A Lys-Trp cation-π interaction mediates the dimerization and function of the chloride intracellular channel protein 1 transmembrane domain.
Bradley Peter, Anton A Polyansky, Sylvia Fanucchi, Heini W Dirr

Biochemistry· January 2014

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