Publications by authors named "Arthur Dondi"

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Ovarian cancer metastasis to the human omentum disrupts organ homeostasis and induces fundamental tissue reprogramming.
Ulrike Lischetti, Ching-Yeu Liang, Matteo Carrara, Ricardo Coelho, Antoine Hanns, Arthur Dondi

Nat Commun· December 2025

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Accurate fusion transcript identification from long- and short-read isoform sequencing at bulk or single-cell resolution.
Qian Qin, Victoria Popic, Kirsty Wienand, Houlin Yu, Emily White, Arthur Dondi

Genome Res· April 2025

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De novo detection of somatic variants in high-quality long-read single-cell RNA sequencing data.
Arthur Dondi, Nico Borgsmüller, Pedro F Ferreira, Brian J Haas, Francis Jacob

Genome Res· April 2025

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Assessing different next-generation sequencing technologies for wastewater-based epidemiology.
Anika John, David Dreifuss, Seju Kang, Anna Bratus-Neuenschwander, Natalia Zajac, Arthur Dondi

Water Res· December 2024

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De novo detection of somatic variants in high-quality long-read single-cell RNA sequencing data.
Arthur Dondi, Nico Borgsmüller, Pedro F Ferreira, Brian J Haas, Francis Jacob

bioRxiv· November 2024

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CTAT-LR-fusion: accurate fusion transcript identification from long and short read isoform sequencing at bulk or single cell resolution.
Qian Qin, Victoria Popic, Houlin Yu, Emily White, Akanksha Khorgade, Arthur Dondi

bioRxiv· February 2024

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V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation.
Lara Fuhrmann, Kim Philipp Jablonski, Ivan Topolsky, Aashil A Batavia, Nico Borgsmüller, Arthur Dondi

Gigascience· January 2024

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Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing in ovarian cancer.
Arthur Dondi, Ulrike Lischetti, Francis Jacob, Franziska Singer, Nico Borgsmüller

Nat Commun· November 2023

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