Publications by authors named "Assaf Gottlieb"

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Editorial: AI/ML in pharmacovigilance and pharmacoepidemiology.
Wen Zou, Pantelis Natsiavas, Assaf Gottlieb

Front Drug Saf Regul· September 2025

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Efficient multi-phenotype genome-wide analysis identifies genetic associations for unsupervised deep-learning-derived high-dimensional brain imaging phenotypes.
Bohong Guo, Ziqian Xie, Wei He, Sheikh Muhammad Saiful Islam, Assaf Gottlieb

medRxiv· December 2024

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Prediction of Mild Cognitive Impairment Status: Pilot Study of Machine Learning Models Based on Longitudinal Data From Fitness Trackers.
Qidi Xu, Yejin Kim, Karen Chung, Paul Schulz, Assaf Gottlieb

JMIR Form Res· July 2024

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Montelukast as a repurposable additive drug for standard-efficacy multiple sclerosis treatment: Emulating clinical trials with retrospective administrative health claims data.
Astrid M Manuel, Assaf Gottlieb, Leorah Freeman, Zhongming Zhao

Mult Scler· May 2024

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Unsupervised deep representation learning enables phenotype discovery for genetic association studies of brain imaging.
Khush Patel, Ziqian Xie, Hao Yuan, Sheikh Muhammad Saiful Islam, Yaochen Xie, Assaf Gottlieb

Commun Biol· April 2024

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Tissue-specific atlas of trans-models for gene regulation elucidates complex regulation patterns.
Robert Dagostino, Assaf Gottlieb

BMC Genomics· April 2024

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Generalizable pipeline for constructing HIV risk prediction models across electronic health record systems.
Sarah B May, Thomas P Giordano, Assaf Gottlieb

J Am Med Inform Assoc· February 2024

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Expanded T lymphocytes in the cerebrospinal fluid of multiple sclerosis patients are specific for Epstein-Barr-virus-infected B cells.
Assaf Gottlieb, H Phuong T Pham, Jerome G Saltarrelli, J William Lindsey

Proc Natl Acad Sci U S A· January 2024

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Molecular pathways enhance drug response prediction using transfer learning from cell lines to tumors and patient-derived xenografts.
Yi-Ching Tang, Reid T Powell, Assaf Gottlieb

Sci Rep· September 2022

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A Method for Bridging Population-Specific Genotypes to Detect Gene Modules Associated with Alzheimer's Disease.
Yulin Dai, Peilin Jia, Zhongming Zhao, Assaf Gottlieb

Cells· July 2022

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SynPathy: Predicting Drug Synergy through Drug-Associated Pathways Using Deep Learning.
Yi-Ching Tang, Assaf Gottlieb

Mol Cancer Res· May 2022

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Tissue-Specific Variations in Transcription Factors Elucidate Complex Immune System Regulation.
Hengwei Lu, Yi-Ching Tang, Assaf Gottlieb

Genes (Basel)· May 2022

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Time dependent analysis of rat microglial surface markers in traumatic brain injury reveals dynamics of distinct cell subpopulations.
Assaf Gottlieb, Naama Toledano-Furman, Karthik S Prabhakara, Akshita Kumar, Henry W Caplan

Sci Rep· April 2022

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Brain Antigens Stimulate Proliferation of T Lymphocytes With a Pathogenic Phenotype in Multiple Sclerosis Patients.
Assaf Gottlieb, Hoai Phuong T Pham, John William Lindsey

Front Immunol· March 2022

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Sociodemographic and Clinical Characteristics Associated with Improvements in Quality of Life for Participants with Opioid Use Disorder.
Assaf Gottlieb, Christine Bakos-Block, James R Langabeer, Tiffany Champagne-Langabeer

Healthcare (Basel)· January 2022

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Machine Learning for Predicting Risk of Early Dropout in a Recovery Program for Opioid Use Disorder.
Assaf Gottlieb, Andrea Yatsco, Christine Bakos-Block, James R Langabeer, Tiffany Champagne-Langabeer

Healthcare (Basel)· January 2022

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A Phenotyping Algorithm to Identify People With HIV in Electronic Health Record Data (HIV-Phen): Development and Evaluation Study.
Sarah B May, Thomas P Giordano, Assaf Gottlieb

JMIR Form Res· November 2021

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Population stratification enables modeling effects of reopening policies on mortality and hospitalization rates.
Tongtong Huang, Yan Chu, Shayan Shams, Yejin Kim, Ananth V Annapragada, Assaf Gottlieb

J Biomed Inform· July 2021

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Comparing diagnostic accuracy of current practice guidelines in predicting choledocholithiasis: outcomes from a large healthcare system comprising both academic and community settings.
Aswathi Chandran, Shahrooz Rashtak, Prithvi Patil, Assaf Gottlieb, Elmer Bernstam

Gastrointest Endosc· June 2021

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Explainable drug sensitivity prediction through cancer pathway enrichment.
Yi-Ching Tang, Assaf Gottlieb

Sci Rep· February 2021

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SCOR: A secure international informatics infrastructure to investigate COVID-19.
J L Raisaro, Francesco Marino, Juan Troncoso-Pastoriza, Raphaelle Beau-Lejdstrom, Riccardo Bellazzi, Assaf Gottlieb

J Am Med Inform Assoc· November 2020

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High-resolution and differential analysis of rat microglial markers in traumatic brain injury: conventional flow cytometric and bioinformatics analysis.
Naama Toledano Furman, Assaf Gottlieb, Karthik S Prabhakara, Supinder Bedi, Henry W Caplan

Sci Rep· July 2020

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Human brain transcriptome analysis finds region- and subject-specific expression signatures of GABAR subunits.
Adolfo Sequeira, Kevin Shen, Assaf Gottlieb, Agenor Limon

Commun Biol· April 2020

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The New HIT: Human Health Information Technology.
Tiffany I Leung, Mary K Goldstein, Mark A Musen, Ruth Cronkite, Jonathan H Chen, Assaf Gottlieb

Stud Health Technol Inform· June 2018

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Estimating the effects of second-line therapy for type 2 diabetes mellitus: retrospective cohort study.
Assaf Gottlieb, Chen Yanover, Amos Cahan, Yaara Goldschmidt

BMJ Open Diabetes Res Care· November 2017

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