Publications by authors named "BA Berg"

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I
Insight into neutral and disease-associated human genetic variants through interpretable predictors.
Bastiaan A van den Berg, Marcel J T Reinders, Dick de Ridder, Tjaart A P de Beer

PLoS One· March 2016

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The dorsal raphe nucleus is integral to negative prediction errors in Pavlovian fear.
Benjamin A Berg, Geoffrey Schoenbaum, Michael A McDannald

Eur J Neurosci· October 2014

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Protein redesign by learning from data.
Bastiaan A van den Berg, Marcel J T Reinders, Jan-Metske van der Laan, Johannes A Roubos, Dick de Ridder

Protein Eng Des Sel· September 2014

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SPiCE: a web-based tool for sequence-based protein classification and exploration.
Bastiaan A van den Berg, Marcel J T Reinders, Johannes A Roubos, Dick de Ridder

BMC Bioinformatics· March 2014

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Key factors in work engagement and job motivation of teaching faculty at a university medical centre.
B A M van den Berg, Arnold B Bakker, Th J Ten Cate

Perspect Med Educ· November 2013

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Disruption of model-based behavior and learning by cocaine self-administration in rats.
Heather M Wied, Joshua L Jones, Nisha K Cooch, Benjamin A Berg, Geoffrey Schoenbaum

Psychopharmacology (Berl)· October 2013

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Neural estimates of imagined outcomes in the orbitofrontal cortex drive behavior and learning.
Yuji K Takahashi, Chun Yun Chang, Federica Lucantonio, Richard Z Haney, Benjamin A Berg

Neuron· October 2013

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Exploring sequence characteristics related to high-level production of secreted proteins in Aspergillus niger.
Bastiaan A van den Berg, Marcel J T Reinders, Marc Hulsman, Liang Wu, Herman J Pel

PLoS One· February 2013

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Vector boson mass generation without new fields.
Bernd A Berg

Phys Rev Lett· June 2012

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Application of Biased Metropolis Algorithms: From protons to proteins.
Alexei Bazavov, Bernd A Berg, Huan-Xiang Zhou

Math Comput Simul· February 2010

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Thermodynamics of two lattice ice models in three dimensions.
Chizuru Muguruma, Yuko Okamoto, Bernd A Berg

Phys Rev E Stat Nonlin Soft Matter Phys· October 2008

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A hybrid recursion method to robustly ensure convergence efficiencies in the simulated scaling based free energy simulations.
Lianqing Zheng, Irina O Carbone, Alexey Lugovskoy, Bernd A Berg, Wei Yang

J Chem Phys· July 2008

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Finite volume Kolmogorov-Johnson-Mehl-Avrami theory.
Bernd A Berg, Santosh Dubey

Phys Rev Lett· April 2008

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Numerical calculation of the combinatorial entropy of partially ordered ice.
Bernd A Berg, Wei Yang

J Chem Phys· December 2007

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Wang-Landau multibondic cluster simulations for second-order phase transitions.
Bernd A Berg, Wolfhard Janke

Phys Rev Lett· January 2007

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Finite reservoir replica exchange to enhance canonical sampling in rugged energy surfaces.
Hongzhi Li, Guohui Li, Bernd A Berg, Wei Yang

J Chem Phys· October 2006

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Rugged Metropolis sampling with simultaneous updating of two dynamical variables.
Bernd A Berg, Huan-Xiang Zhou

Phys Rev E Stat Nonlin Soft Matter Phys· July 2005

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Metropolis simulations of Met-Enkephalin with solvent-accessible area parametrizations.
Bernd A Berg, Hsiao-Ping Hsu

Phys Rev E Stat Nonlin Soft Matter Phys· February 2004

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Multioverlap simulations for transitions between reference configurations.
Bernd A Berg, Hiroshi Noguchi, Yuko Okamoto

Phys Rev E Stat Nonlin Soft Matter Phys· September 2003

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Metropolis importance sampling for rugged dynamical variables.
Bernd A Berg

Phys Rev Lett· May 2003

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Overlap distribution of the three-dimensional Ising model.
Bernd A Berg, Alain Billoire, Wolfhard Janke

Phys Rev E Stat Nonlin Soft Matter Phys· October 2002

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Efficiency of the multicanonical simulation method as applied to peptides of increasing size: the heptapeptide deltorphin.
Fatih Yaşar, Handan Arkin, Tarik Celik, Bernd A Berg, Hagai Meirovitch

J Comput Chem· September 2002

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Functional form of the Parisi overlap distribution for the three-dimensional Edwards-Anderson Ising spin glass.
Bernd A Berg, Alain Billoire, Wolfhard Janke

Phys Rev E Stat Nonlin Soft Matter Phys· April 2002

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Phase diagram of Regge quantum gravity coupled to SU(2) gauge theory.
BA Berg, W Beirl, B Krishnan, H Markum, J Riedler

Phys Rev D Part Fields· December 1996

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Ground-state properties of the three-dimensional Ising spin glass.
BA Berg, UE Hansmann, T Celik

Phys Rev B Condens Matter· December 1994

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