Publications by authors named "Benjamin D Lee"

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Diversity and evolution of viroids and viroid-like agents with circular RNA genomes revealed by metatranscriptome mining.
Eugene V Koonin, Benjamin D Lee

Nucleic Acids Res· January 2025

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, a novel ribovirian phylum for viruses with viroid-like properties.
Jens H Kuhn, Leticia Botella, Marcos de la Peña, Eeva J Vainio, Mart Krupovic, Benjamin D Lee

J Virol· July 2024

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Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs.
Benjamin D Lee, Uri Neri, Simon Roux, Yuri I Wolf, Antonio Pedro Camargo

Cell· February 2023

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Ten quick tips for deep learning in biology.
Benjamin D Lee, Anthony Gitter, Casey S Greene, Sebastian Raschka, Finlay Maguire, Alexandra J Lee

PLoS Comput Biol· March 2022

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ViroidDB: a database of viroids and viroid-like circular RNAs.
Benjamin D Lee, Uri Neri, Caleb J Oh, Peter Simmonds, Eugene V Koonin

Nucleic Acids Res· January 2022

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Viroids and Viroid-like Circular RNAs: Do They Descend from Primordial Replicators?
Benjamin D Lee, Eugene V Koonin

Life (Basel)· January 2022

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A Modified SpeedBridge Technique for Retracted or Delaminated Rotator Cuff Repairs.
Benjamin D Lee, Brian B Gilmer, Sarah D Lang, Dan Guttmann

Arthrosc Tech· November 2019

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DNAvisualization.org: a serverless web tool for DNA sequence visualization.
Benjamin D Lee, Michael A Timony, Pablo Ruiz

Nucleic Acids Res· July 2019

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Squiggle: a user-friendly two-dimensional DNA sequence visualization tool.
Benjamin D Lee

Bioinformatics· April 2019

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Ten simple rules for documenting scientific software.
Benjamin D Lee

PLoS Comput Biol· December 2018

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