Publications by authors named "Benjamin L Kidder"

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De novo protein design enables targeting of intractable oncogenic interfaces.
Varshika Ram Prakash, Yusuf Najy, Kalel Garrett, Brian F P Edwards, Benjamin L Kidder

bioRxiv· October 2025

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Automated Image-Based Profiling of Pluripotent Stem Cell Colonies.
Rui Geng, Benjamin L Kidder

bioRxiv· September 2025

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Stable Maintenance of Two-Cell-Like Cells from Embryonic Stem Cells Reveals Chromatin and Super Enhancer Regulation of MERVL Elements.
Rui Geng, Benjamin L Kidder

bioRxiv· September 2025

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Advanced image generation for cancer using diffusion models.
Benjamin L Kidder

Biol Methods Protoc· August 2024

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Decoding the universal human chromatin landscape through teratoma-based profiling.
Benjamin L Kidder

Nucleic Acids Res· April 2024

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Identifying Cancer Type-Specific Transcriptional Programs through Network Analysis.
Jiji T Kurup, Seongho Kim, Benjamin L Kidder

Cancers (Basel)· August 2023

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Identification of actionable targets for breast cancer intervention using a diversity outbred mouse model.
Jennifer B Jacob, Kuang-Chung Wei, Gerold Bepler, Joyce D Reyes, Andi Cani, Benjamin L Kidder

iScience· April 2023

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H3K4 demethylase KDM5B regulates cancer cell identity and epigenetic plasticity.
Runsheng He, Besa Xhabija, Lijin K Gopi, Jiji T Kurup, Zhishan Xu, Benjamin L Kidder

Oncogene· May 2022

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Mdig promotes oncogenic gene expression through antagonizing repressive histone methylation markers.
Qian Zhang, Chitra Thakur, Yao Fu, Zhuoyue Bi, Priya Wadgaonkar, Benjamin L Kidder

Theranostics· April 2021

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Integrative pan cancer analysis reveals epigenomic variation in cancer type and cell specific chromatin domains.
Lijin K Gopi, Benjamin L Kidder

Nat Commun· March 2021

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Derivation of Maternal Epiblast Stem Cells from Haploid Embryos.
Benjamin L Kidder

Methods Mol Biol· February 2021

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Derivation of LIF-Independent Embryonic Stem Cells Using Inducible OCT4 Expression.
Benjamin L Kidder

Methods Mol Biol· February 2021

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Simultaneous Derivation of Embryonic and Trophoblast Stem Cells from Mouse Blastocysts.
Benjamin L Kidder

Methods Mol Biol· February 2021

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Direct Reprogramming of Mouse Embryonic Fibroblasts to Induced Trophoblast Stem Cells.
Benjamin L Kidder

Methods Mol Biol· February 2021

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H4K20me3 methyltransferase SUV420H2 shapes the chromatin landscape of pluripotent embryonic stem cells.
Jiji T Kurup, Zhijun Han, Wenfei Jin, Benjamin L Kidder

Development· December 2020

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KDM5B is a master regulator of the H3K4-methylome in stem cells, development and cancer.
Besa Xhabija, Benjamin L Kidder

Semin Cancer Biol· August 2019

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Contribution of H3K4 demethylase KDM5B to nucleosome organization in embryonic stem cells revealed by micrococcal nuclease sequencing.
Jiji T Kurup, Ion J Campeanu, Benjamin L Kidder

Epigenetics Chromatin· April 2019

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Strategy for Tumor-Selective Disruption of Androgen Receptor Function in the Spectrum of Prostate Cancer.
Rayna Rosati, Lisa Polin, Charles Ducker, Jing Li, Xun Bao, Benjamin L Kidder

Clin Cancer Res· December 2018

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Identification of H4K20me3- and H3K4me3-associated RNAs using CARIP-Seq expands the transcriptional and epigenetic networks of embryonic stem cells.
Jiji T Kurup, Benjamin L Kidder

J Biol Chem· September 2018

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H4K20me3 co-localizes with activating histone modifications at transcriptionally dynamic regions in embryonic stem cells.
Jian Xu, Benjamin L Kidder

BMC Genomics· July 2018

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Culture of haploid blastocysts in FGF4 favors the derivation of epiblast stem cells with a primed epigenetic and transcriptional landscape.
Runsheng He, Benjamin L Kidder

Sci Rep· July 2018

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KDM5B decommissions the H3K4 methylation landscape of self-renewal genes during trophoblast stem cell differentiation.
Jian Xu, Benjamin L Kidder

Biol Open· May 2018

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CARIP-Seq and ChIP-Seq: Methods to Identify Chromatin-Associated RNAs and Protein-DNA Interactions in Embryonic Stem Cells.
Benjamin L Kidder

J Vis Exp· May 2018

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Generation of Tumor Antigen-Specific iPSC-Derived Thymic Emigrants Using a 3D Thymic Culture System.
Raul Vizcardo, Nicholas D Klemen, S M Rafiqul Islam, Devikala Gurusamy, Naritaka Tamaoki, Benjamin L Kidder

Cell Rep· March 2018

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OCT4 supports extended LIF-independent self-renewal and maintenance of transcriptional and epigenetic networks in embryonic stem cells.
Runsheng He, Besa Xhabija, Batool Al-Qanber, Benjamin L Kidder

Sci Rep· November 2017

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