Publications by authors named "Bo Segerman"

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European Union Reference Laboratories support the National food, feed and veterinary Reference Laboratories with rolling out whole genome sequencing in Europe.
Valeria Michelacci, Adrien Asséré, Simone Cacciò, Marina Cavaiuolo, Kirsten Mooijman, Bo Segerman

Microb Genom· July 2023

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The efficiency of Nextera XT tagmentation depends on G and C bases in the binding motif leading to uneven coverage in bacterial species with low and neutral GC-content.
Bo Segerman, Ásgeir Ástvaldsson, Linda Mustafa, Joakim Skarin, Hanna Skarin

Front Microbiol· July 2022

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The Most Frequently Used Sequencing Technologies and Assembly Methods in Different Time Segments of the Bacterial Surveillance and RefSeq Genome Databases.
Bo Segerman

Front Cell Infect Microbiol· June 2021

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The Human Adenovirus Type 2 Transcriptome: An Amazing Complexity of Alternatively Spliced mRNAs.
Amanda Westergren Jakobsson, Bo Segerman, Ola Wallerman, Sara Bergström Lind, Hongxing Zhao

J Virol· February 2021

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A shotgun metagenomic investigation of the microbiota of udder cleft dermatitis in comparison to healthy skin in dairy cows.
Lisa Ekman, Elisabeth Bagge, Ann Nyman, Karin Persson Waller, Märit Pringle, Bo Segerman

PLoS One· January 2021

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Mesenchymal transition and increased therapy resistance of glioblastoma cells is related to astrocyte reactivity.
Mia Niklasson, Tobias Bergström, Malin Jarvius, Anders Sundström, Frida Nyberg, Bo Segerman, Anna Segerman

J Pathol· November 2019

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Clonal Variation in Drug and Radiation Response among Glioma-Initiating Cells Is Linked to Proneural-Mesenchymal Transition.
Anna Segerman, Mia Niklasson, Caroline Haglund, Tobias Bergström, Malin Jarvius, Bo Segerman

Cell Rep· December 2016

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Genetic analysis of a Treponema phagedenis locus encoding antigenic lipoproteins with potential for antigenic variation.
Mamoona Mushtaq, Erik Bongcam-Rudloff, Heidur Loftsdottir, Märit Pringle, Bo Segerman

Vet Microbiol· June 2016

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Small RNA sequence analysis of adenovirus VA RNA-derived miRNAs reveals an unexpected serotype-specific difference in structure and abundance.
Wael Kamel, Bo Segerman, Tanel Punga, Göran Akusjärvi

PLoS One· November 2015

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Plasmidome interchange between Clostridium botulinum, Clostridium novyi and Clostridium haemolyticum converts strains of independent lineages into distinctly different pathogens.
Hanna Skarin, Bo Segerman

PLoS One· June 2015

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Microevolution during an Anthrax outbreak leading to clonal heterogeneity and penicillin resistance.
Joakim Ågren, Maria Finn, Björn Bengtsson, Bo Segerman

PLoS One· October 2014

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Genome-wide relatedness of Treponema pedis, from gingiva and necrotic skin lesions of pigs, with the human oral pathogen Treponema denticola.
Olov Svartström, Memoona Mushtaq, Märit Pringle, Bo Segerman

PLoS One· April 2014

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The genetic integrity of bacterial species: the core genome and the accessory genome, two different stories.
Bo Segerman

Front Cell Infect Microbiol· December 2013

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In silico and in vitro evaluation of PCR-based assays for the detection of Bacillus anthracis chromosomal signature sequences.
Joakim Ågren, Raditijo A Hamidjaja, Trine Hansen, Robin Ruuls, Simon Thierry, Bo Segerman

Virulence· November 2013

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Management of animal botulism outbreaks: from clinical suspicion to practical countermeasures to prevent or minimize outbreaks.
Fabrizio Anniballi, Alfonsina Fiore, Charlotta Löfström, Hanna Skarin, Bruna Auricchio, Bo Segerman

Biosecur Bioterror· September 2013

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Multiplex real-time PCR for detecting and typing Clostridium botulinum group III organisms and their mosaic variants.
Fabrizio Anniballi, Bruna Auricchio, Cédric Woudstra, Patrick Fach, Alfonsina Fiore, Bo Segerman

Biosecur Bioterror· September 2013

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The adenovirus VA RNA-derived miRNAs are not essential for lytic virus growth in tissue culture cells.
Wael Kamel, Bo Segerman, Daniel Öberg, Tanel Punga, Göran Akusjärvi

Nucleic Acids Res· May 2013

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Gegenees: fragmented alignment of multiple genomes for determining phylogenomic distances and genetic signatures unique for specified target groups.
Joakim Agren, Anders Sundström, Therese Håfström, Bo Segerman

PLoS One· December 2012

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Horizontal gene transfer of toxin genes in Clostridium botulinum: Involvement of mobile elements and plasmids.
Hanna Skarin, Bo Segerman

Mob Genet Elements· September 2011

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Complete genome sequence of Brachyspira intermedia reveals unique genomic features in Brachyspira species and phage-mediated horizontal gene transfer.
Therese Håfström, Désirée S Jansson, Bo Segerman

BMC Genomics· August 2011

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Clostridium botulinum group III: a group with dual identity shaped by plasmids, phages and mobile elements.
Hanna Skarin, Therese Håfström, Josefina Westerberg, Bo Segerman

BMC Genomics· April 2011

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Bioinformatic tools for using whole genome sequencing as a rapid high resolution diagnostic typing tool when tracing bioterror organisms in the food and feed chain.
Bo Segerman, Dario De Medici, Monika Ehling Schulz, Patrick Fach, Lucia Fenicia

Int J Food Microbiol· March 2011

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A multiplex real-time PCR for identifying and differentiating B. anthracis virulent types.
Peter R Wielinga, Raditijo A Hamidjaja, Joakim Agren, Rickard Knutsson, Bo Segerman

Int J Food Microbiol· March 2011

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Accidental and deliberate microbiological contamination in the feed and food chains--how biotraceability may improve the response to bioterrorism.
Rickard Knutsson, Bart van Rotterdam, Patrick Fach, Dario De Medici, Martina Fricker, Bo Segerman

Int J Food Microbiol· March 2011

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Towards an international standard for detection and typing botulinum neurotoxin-producing Clostridia types A, B, E and F in food, feed and environmental samples: a European ring trial study to evaluate a real-time PCR assay.
Lucia Fenicia, Patrick Fach, Bart J van Rotterdam, Fabrizio Anniballi, Bo Segerman

Int J Food Microbiol· March 2011

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