Publications by authors named "Bosco Ho"

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HLA class II immunopeptidomics reveals that co-inherited HLA-allotypes within an extended haplotype can improve proteome coverage for immunosurveillance.
Sri H Ramarathinam, Bosco K Ho, Nadine L Dudek, Anthony W Purcell

Proteomics· September 2021

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SARS-CoV-2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms.
Seán I O'Donoghue, Andrea Schafferhans, Neblina Sikta, Christian Stolte, Sandeep Kaur, Bosco K Ho

Mol Syst Biol· September 2021

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MHC-I peptides get out of the groove and enable a novel mechanism of HIV-1 escape.
Phillip Pymm, Patricia T Illing, Sri H Ramarathinam, Geraldine M O'Connor, Victoria A Hughes, Bosco K Ho, Anthony W Purcell

Nat Struct Mol Biol· April 2017

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Physicochemical properties that control protein aggregation also determine whether a protein is retained or released from necrotic cells.
Andre L Samson, Bosco Ho, Amanda E Au, Simone M Schoenwaelder, Mark J Smyth

Open Biol· November 2016

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Proteomic characterization of a natural host-pathogen interaction: repertoire of in vivo expressed bacterial and host surface-associated proteins.
Megan A Rees, Oded Kleifeld, Paul K Crellin, Bosco Ho, Timothy P Stinear

J Proteome Res· January 2015

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Granzyme B promotes cytotoxic lymphocyte transmigration via basement membrane remodeling.
Monica D Prakash, Marcia A Munoz, Rohit Jain, Philip L Tong, Aulikki Koskinen, Bosco Ho

Immunity· December 2014

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Interactive visualization tools for the structural biologist.
Benjamin T Porebski, Bosco K Ho, Ashley M Buckle

J Appl Crystallogr· October 2013

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Inmembrane, a bioinformatic workflow for annotation of bacterial cell-surface proteomes.
Andrew J Perry, Bosco K Ho

Source Code Biol Med· March 2013

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Hybrid approaches to molecular simulation.
Bosco K Ho, David Perahia, Ashley M Buckle

Curr Opin Struct Biol· June 2012

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An improved strategy for generating forces in steered molecular dynamics: the mechanical unfolding of titin, e2lip3 and ubiquitin.
Bosco K Ho, David A Agard

PLoS One· September 2010

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Conserved tertiary couplings stabilize elements in the PDZ fold, leading to characteristic patterns of domain conformational flexibility.
Bosco K Ho, David A Agard

Protein Sci· March 2010

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Unfolding simulations reveal the mechanism of extreme unfolding cooperativity in the kinetically stable alpha-lytic protease.
Neema L Salimi, Bosco Ho, David A Agard

PLoS Comput Biol· February 2010

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Probing the flexibility of large conformational changes in protein structures through local perturbations.
Bosco K Ho, David A Agard

PLoS Comput Biol· April 2009

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HOLLOW: generating accurate representations of channel and interior surfaces in molecular structures.
Bosco K Ho, Franz Gruswitz

BMC Struct Biol· November 2008

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Identification of new, well-populated amino-acid sidechain rotamers involving hydroxyl-hydrogen atoms and sulfhydryl-hydrogen atoms.
Bosco K Ho, David A Agard

BMC Struct Biol· October 2008

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Folding very short peptides using molecular dynamics.
Bosco K Ho, Ken A Dill

PLoS Comput Biol· April 2006

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The Ramachandran plots of glycine and pre-proline.
Bosco K Ho, Robert Brasseur

BMC Struct Biol· August 2005

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The flexibility in the proline ring couples to the protein backbone.
Bosco K Ho, Evangelos A Coutsias, Chaok Seok, Ken A Dill

Protein Sci· April 2005

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Revisiting the Ramachandran plot: hard-sphere repulsion, electrostatics, and H-bonding in the alpha-helix.
Bosco K Ho, Annick Thomas, Robert Brasseur

Protein Sci· November 2003

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Twist and shear in beta-sheets and beta-ribbons.
Bosco K Ho, Paul M G Curmi

J Mol Biol· March 2002

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