Publications by authors named "Botond Sipos"

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Ensembl 2026.
Andrew D Yates, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes, Botond Sipos

Nucleic Acids Res· November 2025

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Ensembl 2025.
Sarah C Dyer, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes, Botond Sipos

Nucleic Acids Res· January 2025

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Cell Tree Rings: the structure of somatic evolution as a human aging timer.
Attila Csordas, Botond Sipos, Terezia Kurucova, Andrea Volfova, Frantisek Zamola

Geroscience· June 2024

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SeqKit2: A Swiss army knife for sequence and alignment processing.
Wei Shen, Botond Sipos, Liuyang Zhao

Imeta· June 2024

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Ensembl 2024.
Peter W Harrison, M Ridwan Amode, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, Botond Sipos

Nucleic Acids Res· January 2024

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Ensembl 2023.
Fergal J Martin, M Ridwan Amode, Alisha Aneja, Olanrewaju Austine-Orimoloye, Andrey G Azov, Botond Sipos

Nucleic Acids Res· January 2023

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In Vivo Validation of Alternative FDXR Transcripts in Human Blood in Response to Ionizing Radiation.
Lourdes Cruz-Garcia, Grainne O'Brien, Botond Sipos, Simon Mayes, Aleš Tichý

Int J Mol Sci· October 2020

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Generation of a Transcriptional Radiation Exposure Signature in Human Blood Using Long-Read Nanopore Sequencing.
Lourdes Cruz-Garcia, Grainne O'Brien, Botond Sipos, Simon Mayes, Michael I Love

Radiat Res· February 2020

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Highly parallel direct RNA sequencing on an array of nanopores.
Daniel R Garalde, Elizabeth A Snell, Daniel Jachimowicz, Botond Sipos, Joseph H Lloyd

Nat Methods· March 2018

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Amino acid changes in disease-associated variants differ radically from variants observed in the 1000 genomes project dataset.
Tjaart A P de Beer, Roman A Laskowski, Sarah L Parks, Botond Sipos, Nick Goldman

PLoS Comput Biol· August 2014

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Phylogenetic quantification of intra-tumour heterogeneity.
Roland F Schwarz, Anne Trinh, Botond Sipos, James D Brenton, Nick Goldman

PLoS Comput Biol· April 2014

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Systematic evaluation of spliced alignment programs for RNA-seq data.
Pär G Engström, Tamara Steijger, Botond Sipos, Gregory R Grant, André Kahles

Nat Methods· December 2013

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SMIM1 underlies the Vel blood group and influences red blood cell traits.
Ana Cvejic, Lonneke Haer-Wigman, Jonathan C Stephens, Myrto Kostadima, Peter A Smethurst, Botond Sipos

Nat Genet· May 2013

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An improved protocol for sequencing of repetitive genomic regions and structural variations using mutagenesis and next generation sequencing.
Botond Sipos, Tim Massingham, Adrian M Stütz, Nick Goldman

PLoS One· March 2013

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Towards practical, high-capacity, low-maintenance information storage in synthesized DNA.
Nick Goldman, Paul Bertone, Siyuan Chen, Christophe Dessimoz, Emily M LeProust, Botond Sipos

Nature· February 2013

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Exome sequencing identifies NBEAL2 as the causative gene for gray platelet syndrome.
Cornelis A Albers, Ana Cvejic, Rémi Favier, Evelien E Bouwmans, Marie-Christine Alessi, Botond Sipos

Nat Genet· July 2011

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PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment.
Botond Sipos, Tim Massingham, Gregory E Jordan, Nick Goldman

BMC Bioinformatics· April 2011

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A conserved gene cluster as a putative functional unit in insect innate immunity.
Kálmán Somogyi, Botond Sipos, Zsolt Pénzes, István Andó

FEBS Lett· November 2010

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Sessile hemocytes as a hematopoietic compartment in Drosophila melanogaster.
Róbert Márkus, Barbara Laurinyecz, Eva Kurucz, Viktor Honti, Izabella Bajusz, Botond Sipos

Proc Natl Acad Sci U S A· March 2009

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Evolution of genes and repeats in the Nimrod superfamily.
Kálmán Somogyi, Botond Sipos, Zsolt Pénzes, Eva Kurucz, János Zsámboki

Mol Biol Evol· November 2008

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T2prhd: a tool to study the patterns of repeat evolution.
Botond Sipos, Kálmán Somogyi, István Andó, Zsolt Pénzes

BMC Bioinformatics· January 2008

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