Publications by authors named "Brian D O'Connor"

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A Framework for the Interoperability of Cloud Platforms: Towards FAIR Data in SAFE Environments.
Robert L Grossman, Rebecca R Boyles, Brandi N Davis-Dusenbery, Amanda Haddock, Allison P Heath, Brian D O'Connor

Sci Data· February 2024

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Author Correction: Mutations in PYCR1 cause cutis laxa with progeroid features.
Bruno Reversade, Nathalie Escande-Beillard, Aikaterini Dimopoulou, Björn Fischer, Serene C Chng, Brian D O'Connor

Nat Genet· February 2022

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Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space.
Michael C Schatz, Anthony A Philippakis, Enis Afgan, Eric Banks, Vincent J Carey, Brian D O'Connor

Cell Genom· January 2022

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GA4GH: International policies and standards for data sharing across genomic research and healthcare.
Heidi L Rehm, Angela J H Page, Lindsay Smith, Jeremy B Adams, Gil Alterovitz, Brian D O'Connor

Cell Genom· November 2021

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The Dockstore: enhancing a community platform for sharing reproducible and accessible computational protocols.
Denis Yuen, Louise Cabansay, Andrew Duncan, Gary Luu, Gregory Hogue, Brian D O'Connor

Nucleic Acids Res· July 2021

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A user guide for the online exploration and visualization of PCAWG data.
Mary J Goldman, Junjun Zhang, Nuno A Fonseca, Isidro Cortés-Ciriano, Qian Xiang, Brian D O'Connor

Nat Commun· July 2020

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Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience.
Azza E Ahmed, Phelelani T Mpangase, Sumir Panji, Shakuntala Baichoo, Yassine Souilmi, Brian D O'Connor

AAS Open Res· August 2019

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Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics.
Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Brian D O'Connor

BMC Bioinformatics· November 2018

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Correction: U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line.
Michael James Clark, Nils Homer, Brian D O'Connor, Zugen Chen, Ascia Eskin

PLoS Genet· May 2018

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The Dockstore: enabling modular, community-focused sharing of Docker-based genomics tools and workflows.
Brian D O'Connor, Denis Yuen, Vincent Chung, Andrew G Duncan, Xiang Kun Liu

F1000Res· January 2017

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New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing.
Andreas Keller, Angela Graefen, Markus Ball, Mark Matzas, Valesca Boisguerin, Brian D O'Connor

Nat Commun· February 2012

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Multiple self-healing squamous epithelioma is caused by a disease-specific spectrum of mutations in TGFBR1.
David R Goudie, Mariella D'Alessandro, Barry Merriman, Hane Lee, Ildikó Szeverényi, Brian D O'Connor

Nat Genet· February 2011

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SeqWare Query Engine: storing and searching sequence data in the cloud.
Brian D O'Connor, Barry Merriman, Stanley F Nelson

BMC Bioinformatics· December 2010

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U87MG decoded: the genomic sequence of a cytogenetically aberrant human cancer cell line.
Michael James Clark, Nils Homer, Brian D O'Connor, Zugen Chen, Ascia Eskin

PLoS Genet· January 2010

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Improving the efficiency of genomic loci capture using oligonucleotide arrays for high throughput resequencing.
Hane Lee, Brian D O'Connor, Barry Merriman, Vincent A Funari, Nils Homer

BMC Genomics· December 2009

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Mutations in PYCR1 cause cutis laxa with progeroid features.
Bruno Reversade, Nathalie Escande-Beillard, Aikaterini Dimopoulou, Björn Fischer, Serene C Chng, Brian D O'Connor

Nat Genet· September 2009

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Pathogenicity of a disease-associated human IL-4 receptor allele in experimental asthma.
Raffi Tachdjian, Clinton Mathias, Shadi Al Khatib, Paul J Bryce, Hong S Kim, Brian D O'Connor

J Exp Med· September 2009

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GMODWeb: a web framework for the Generic Model Organism Database.
Brian D O'Connor, Allen Day, Scott Cain, Olivier Arnaiz, Linda Sperling

Genome Biol· August 2008

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Celsius: a community resource for Affymetrix microarray data.
Allen Day, Marc R J Carlson, Jun Dong, Brian D O'Connor, Stanley F Nelson

Genome Biol· February 2008

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Utilizing logical relationships in genomic data to decipher cellular processes.
Peter M Bowers, Brian D O'Connor, Shawn J Cokus, Einat Sprinzak, Todd O Yeates

FEBS J· October 2005

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The genomics of disulfide bonding and protein stabilization in thermophiles.
Morgan Beeby, Brian D O'Connor, Carsten Ryttersgaard, Daniel R Boutz, L Jeanne Perry

PLoS Biol· September 2005

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GDAP: a web tool for genome-wide protein disulfide bond prediction.
Brian D O'Connor, Todd O Yeates

Nucleic Acids Res· July 2004

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