Publications by authors named "Brian Scheffler"

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Chromosome-scale assemblies of flowering dogwood cultivars enable identification of candidate genes regulating anthocyanin biosynthesis in leaves and bracts.
Trinity P Hamm, Sarah L Boggess, Marcin Nowicki, Denita Hadziabdic, DeWayne Shoemaker, Brian E Scheffler

BMC Plant Biol· December 2025

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Genome report: whole-genome assembly of the relapsing fever tick Ornithodoros turicata Dugès (Acari: Argasidae).
Mackenzie Tietjen, Amanda R Stahlke, David Luecke, Perot Saelao, Sheina B Sim, Brian E Scheffler

G3 (Bethesda)· July 2025

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Genetic marker data for sweetpotato improvement.
Imana L Power, Brian E Scheffler, Xiaofen F Liu, Sheron A Simpson, Linda L Ballard

Data Brief· June 2025

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The genome assembly of the westslope cutthroat trout, Oncorhynchus lewisi, reveals interspecific chromosomal rearrangements with the rainbow trout, Oncorhynchus mykiss.
Anne-Marie Flores, Kris A Christensen, Theresa Godin, Yniv Palti, Matthew R Campbell, Brian E Scheffler

G3 (Bethesda)· May 2025

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Genetic and physical localization of a leaf rust susceptibility gene in barley.
Ruiying Liu, Dangping Luo, Brian E Scheffler, Amanda M Hulse-Kemp, Megan Overlander-Chen

Theor Appl Genet· May 2025

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Near-complete genome sequence of a type-A deformed wing virus discovered from in Mississippi, USA.
Xiaofen Liu, Godfrey Miles, Yu-Cheng Zhu, Michael Grodowitz, Esmaeil Amiri, Brian Scheffler

Microbiol Resour Announc· February 2025

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Chromosome level genome assembly and annotation of the Swanson rainbow trout homozygous line.
Ali Ali, Guangtu Gao, Rafet Al-Tobasei, Ramey C Youngblood, Geoffrey C Waldbieser, Brian E Scheffler

Sci Data· February 2025

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A fully phased, chromosome-scale genome of sugar beet line FC309 enables the discovery of Fusarium yellows resistance QTL.
Olivia E Todd, Sheron Simpson, Brian Scheffler, Kevin M Dorn

DNA Res· December 2024

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Chromosome-scale genome assembly of the hunt bumble bee, Bombus huntii Greene, 1860, a species of agricultural interest.
Jonathan Berenguer Uhuad Koch, Sheina B Sim, Brian Scheffler, Jeffrey D Lozier, Scott M Geib

G3 (Bethesda)· October 2024

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Chromosome-scale genome of the polyphagous pest Anastrepha ludens (Diptera: Tephritidae) provides insights on sex chromosome evolution in Anastrepha.
Carlos Congrains, Sheina B Sim, Daniel F Paulo, Renee L Corpuz, Angela N Kauwe, Brian E Scheffler

G3 (Bethesda)· October 2024

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Solenopsis richteri (Hymenoptera: Formicidae) alates infected with deformed wing virus display wing deformity with altered mobility.
Godfrey P Miles, Xiaofen F Liu, Brian E Scheffler, Esmaeil Amiri, Mark A Weaver

Naturwissenschaften· September 2024

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Hypothalamic transcriptome response to simulated diel earthen pond hypoxia cycles in channel catfish ().
Brian D Ott, Amanda M Hulse-Kemp, Mary V Duke, Matt J Griffin, Brian C Peterson, Brian E Scheffler

Physiol Genomics· August 2024

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Genome report: chromosome-scale genome assembly of the West Indian fruit fly Anastrepha obliqua (Diptera: Tephritidae).
Sheina B Sim, Carlos Congrains, Sandra M Velasco-Cuervo, Renee L Corpuz, Angela N Kauwe, Brian Scheffler

G3 (Bethesda)· April 2024

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Two haplotype-resolved genomes reveal important flower traits in bigleaf hydrangea () and insights into Asterid evolution.
Xingbo Wu, Sheron A Simpson, Ramey C Youngblood, Xiaofen F Liu, Brian E Scheffler

Hortic Res· December 2023

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Representing true plant genomes: haplotype-resolved hybrid pepper genome with trio-binning.
Emily E Delorean, Ramey C Youngblood, Sheron A Simpson, Ashley N Schoonmaker, Brian E Scheffler

Front Plant Sci· November 2023

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The generation of the first chromosome-level de novo genome assembly and the development and validation of a 50K SNP array for the St. John River aquaculture strain of North American Atlantic salmon.
Guangtu Gao, Geoffrey C Waldbieser, Ramey C Youngblood, Dongyan Zhao, Michael R Pietrak, Brian E Scheffler

G3 (Bethesda)· August 2023

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Chromosome-scale genome assembly of the rusty patched bumble bee, Bombus affinis (Cresson) (Hymenoptera: Apidae), an endangered North American pollinator.
Jonathan Berenguer Uhuad Koch, Sheina B Sim, Brian Scheffler, Scott M Geib, Tamara A Smith

G3 (Bethesda)· August 2023

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Long-read, chromosome-scale assembly of Vitis rotundifolia cv. Carlos and its unique resistance to Xylella fastidiosa subsp. fastidiosa.
Matthew Huff, Amanda M Hulse-Kemp, Brian E Scheffler, Ramey C Youngblood, Sheron A Simpson

BMC Genomics· July 2023

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Whole-genome resequencing data support a single introduction of the invasive white pine sawfly, Diprion similis.
Jeremy S Davis, Sheina Sim, Scott Geib, Brian Scheffler, Catherine R Linnen

J Hered· May 2023

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Chromosome-scale genome assembly of the pink bollworm, Pectinophora gossypiella, a global pest of cotton.
Amanda R Stahlke, Jennifer Chang, Sivanandan Chudalayandi, Chan C Heu, Scott M Geib, Brian E Scheffler

G3 (Bethesda)· April 2023

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Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions.
Geoffrey C Waldbieser, Shikai Liu, Zihao Yuan, Caitlin E Older, Dongya Gao, Brian Scheffler

BMC Biol· April 2023

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A Chromosome-Scale Genome Assembly of a Helicoverpa zea Strain Resistant to Bacillus thuringiensis Cry1Ac Insecticidal Protein.
Amanda R Stahlke, Jennifer Chang, Luke R Tembrock, Sheina B Sim, Sivanandan Chudalayandi, Brian E Scheffler

Genome Biol Evol· March 2023

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Detecting Cotton Leaf Curl Virus Resistance Quantitative Trait Loci in and iCottonQTL a New R/Shiny App to Streamline Genetic Mapping.
Ashley N Schoonmaker, Amanda M Hulse-Kemp, Ramey C Youngblood, Zainab Rahmat, Muhammad Atif Iqbal, Brian E Scheffler, Jodi A Scheffler

Plants (Basel)· March 2023

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Genome and Genetic Engineering of the House Cricket (): A Resource for Sustainable Agriculture.
Aaron T Dossey, Brenda Oppert, Fu-Chyun Chu, Marcé D Lorenzen, Brian Scheffler

Biomolecules· March 2023

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Initiation of genomics-assisted breeding in Virginia-type peanuts through the generation of a reference genome and informative markers.
Cassondra S Newman, Ryan J Andres, Ramey C Youngblood, Jacqueline D Campbell, Sheron A Simpson, Brian E Scheffler

Front Plant Sci· January 2023

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