Publications by authors named "Burkhard Linke"

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Flexible metagenome analysis using the MGX framework.
Sebastian Jaenicke, Stefan P Albaum, Patrick Blumenkamp, Burkhard Linke, Jens Stoye

Microbiome· April 2018

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The Genome of the Toluene-Degrading Pseudomonas veronii Strain 1YdBTEX2 and Its Differential Gene Expression in Contaminated Sand.
Marian Morales, Vladimir Sentchilo, Claire Bertelli, Andrea Komljenovic, Nadezda Kryuchkova-Mostacci, Burkhard Linke

PLoS One· July 2017

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Apparent vector-mediated parent-to-offspring transmission in an avian malaria-like parasite.
Nayden Chakarov, Burkhard Linke, Martina Boerner, Alexander Goesmann, Oliver Krüger

Mol Ecol· March 2015

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Sequencing and characterizing the genome of Estrella lausannensis as an undergraduate project: training students and biological insights.
Claire Bertelli, Sébastien Aeby, Bérénice Chassot, James Clulow, Olivier Hilfiker, Burkhard Linke

Front Microbiol· March 2015

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Comprehensive molecular, genomic and phenotypic analysis of a major clone of Enterococcus faecalis MLST ST40.
Melanie Zischka, Carsten T Künne, Jochen Blom, Dominique Wobser, Türkân Sakιnç, Burkhard Linke

BMC Genomics· March 2015

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Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds.
Ryo Miyazaki, Claire Bertelli, Paola Benaglio, Jonas Canton, Nicoló De Coi, Burkhard Linke

Environ Microbiol· January 2015

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Virulence genes in clinical and environmental Stenotrophomas maltophilia isolates: a genome sequencing and gene expression approach.
Martina Adamek, Burkhard Linke, Thomas Schwartz

Microb Pathog· November 2014

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Chinese hamster genome sequenced from sorted chromosomes.
Karina Brinkrolf, Oliver Rupp, Holger Laux, Florian Kollin, Wolfgang Ernst, Burkhard Linke

Nat Biotechnol· August 2013

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Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage.
Stefan Heinl, Daniel Wibberg, Felix Eikmeyer, Rafael Szczepanowski, Jochen Blom, Burkhard Linke

J Biotechnol· October 2012

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Complete genome sequence of the porcine isolate Enterococcus faecalis D32.
Melanie Zischka, Carsten Kuenne, Jochen Blom, Piotr W Dabrowski, Burkhard Linke

J Bacteriol· October 2012

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RAPYD--rapid annotation platform for yeast data.
Jessica Schneider, Jochen Blom, Sebastian Jaenicke, Burkhard Linke, Karina Brinkrolf

J Biotechnol· August 2011

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The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.
Susanne Schneiker-Bekel, Daniel Wibberg, Thomas Bekel, Jochen Blom, Burkhard Linke

J Biotechnol· August 2011

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Conveyor: a workflow engine for bioinformatic analyses.
Burkhard Linke, Robert Giegerich, Alexander Goesmann

Bioinformatics· April 2011

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Virulence evolution of the human pathogen Neisseria meningitidis by recombination in the core and accessory genome.
Biju Joseph, Roland F Schwarz, Burkhard Linke, Jochen Blom, Anke Becker

PLoS One· April 2011

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Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence.
Biju Joseph, Susanne Schneiker-Bekel, Anja Schramm-Glück, Jochen Blom, Heike Claus, Burkhard Linke

J Bacteriol· October 2010

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Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.
Eva Trost, Susanne Götker, Jessica Schneider, Susanne Schneiker-Bekel, Rafael Szczepanowski, Burkhard Linke

BMC Genomics· February 2010

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Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics.
Rafael Szczepanowski, Burkhard Linke, Irene Krahn, Karl-Heinz Gartemann, Tim Gützkow

Microbiology (Reading)· July 2009

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A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data.
Anke Becker, Melanie J Barnett, Delphine Capela, Michael Dondrup, Paul-Bertram Kamp, Burkhard Linke

J Biotechnol· March 2009

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EMMA 2--a MAGE-compliant system for the collaborative analysis and integration of microarray data.
Michael Dondrup, Stefan P Albaum, Thasso Griebel, Kolja Henckel, Sebastian Jünemann, Burkhard Linke

BMC Bioinformatics· February 2009

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The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae.
Roy Gross, Carlos A Guzman, Mohammed Sebaihia, Vítor A P Martins dos Santos, Dietmar H Pieper, Burkhard Linke

BMC Genomics· September 2008

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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity.
Karl-Heinz Gartemann, Birte Abt, Thomas Bekel, Annette Burger, Jutta Engemann, Burkhard Linke

J Bacteriol· March 2008

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The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.
Frank-Jörg Vorhölter, Susanne Schneiker, Alexander Goesmann, Lutz Krause, Thomas Bekel, Burkhard Linke

J Biotechnol· March 2008

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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis.
Christoph Schoen, Jochen Blom, Heike Claus, Anja Schramm-Glück, Petra Brandt, Burkhard Linke

Proc Natl Acad Sci U S A· March 2008

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Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara.
Christine Meisinger-Henschel, Michaela Schmidt, Susanne Lukassen, Burkhard Linke, Lutz Krause

J Gen Virol· December 2007

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A prototype taxonomic microarray targeting the rpsA housekeeping gene permits species identification within the rhizobial genus Ensifer.
Miet Martens, Stefan Weidner, Burkhard Linke, Paul de Vos, Monique Gillis

Syst Appl Microbiol· July 2007

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