Publications by authors named "Caitlin Singleton"

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Microbial aerotrophy enables continuous primary production in diverse cave ecosystems.
Sean K Bay, Gaofeng Ni, Rachael Lappan, Pok Man Leung, Wei Wen Wong, Caitlin M Singleton

Nat Commun· November 2025

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Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats.
Mantas Sereika, Aaron James Mussig, Chenjing Jiang, Kalinka Sand Knudsen, Thomas Bygh Nymann Jensen, Caitlin Margaret Singleton

Nat Microbiol· August 2025

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Diversity and abundance of filamentous and non-filamentous " in global wastewater treatment plants.
Karina Seguel Suazo, Marta Nierychlo, Zivile Kondrotaite, Francesca Petriglieri, Miriam Peces, Caitlin Singleton

Appl Environ Microbiol· March 2025

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Diversity and physiology of abundant Rhodoferax species in global wastewater treatment systems.
Jette F Petersen, Laura C Valk, Maarten D Verhoeven, Marta A Nierychlo, Caitlin M Singleton

Syst Appl Microbiol· January 2025

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Proposal of gen. nov., sp. nov. in the ubiquitous bacterial phylum phyl. nov.
Zuzanna Dutkiewicz, Caitlin M Singleton, Mantas Sereika, Juan C Villada, Aaron J Mussig

ISME Commun· January 2025

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Occurrence and temporal dynamics of denitrifying protist endosymbionts in the wastewater microbiome.
Louison Nicolas-Asselineau, Daan R Speth, Linus M Zeller, Ben J Woodcroft, Caitlin M Singleton

ISME Commun· January 2025

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The predicted secreted proteome of activated sludge microorganisms indicates distinct nutrient niches.
Kenneth Wasmund, Caitlin Singleton, Morten Kam Dahl Dueholm, Michael Wagner, Per Halkjær Nielsen

mSystems· October 2024

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A comprehensive overview of the Chloroflexota community in wastewater treatment plants worldwide.
Francesca Petriglieri, Zivile Kondrotaite, Caitlin Singleton, Marta Nierychlo, Morten K D Dueholm

mSystems· December 2023

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Long-Read Metagenome-Assembled Genomes Improve Identification of Novel Complete Biosynthetic Gene Clusters in a Complex Microbial Activated Sludge Ecosystem.
Roberto Sánchez-Navarro, Matin Nuhamunada, Omkar S Mohite, Kenneth Wasmund, Mads Albertsen, Caitlin M Singleton

mSystems· December 2022

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Exploring the microbial influence on seasonal nitrous oxide concentration in a full-scale wastewater treatment plant using metagenome assembled genomes.
Laura Christina Valk, Miriam Peces, Caitlin Margaret Singleton, Mads Dyring Laursen, Mikkel Holmen Andersen

Water Res· July 2022

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Diversity and Ecophysiology of the Genus OLB8 and Other Abundant Uncultured Genera in Global Wastewater Treatment Systems.
Zivile Kondrotaite, Laura C Valk, Francesca Petriglieri, Caitlin Singleton, Marta Nierychlo

Front Microbiol· July 2022

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Reevaluation of the Phylogenetic Diversity and Global Distribution of the Genus " Accumulibacter".
Francesca Petriglieri, Caitlin M Singleton, Zivile Kondrotaite, Morten K D Dueholm, Elizabeth A McDaniel

mSystems· June 2022

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Monitoring antibiotic resistance genes in wastewater environments: The challenges of filling a gap in the One-Health cycle.
Aleksandra Miłobedzka, Catarina Ferreira, Ivone Vaz-Moreira, David Calderón-Franco, Adrian Gorecki, Caitlin M Singleton

J Hazard Mater· February 2022

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Functional Neuroanatomy of the Rat Nucleus Incertus-Medial Septum Tract: Implications for the Cell-Specific Control of the Septohippocampal Pathway.
Agata Szlaga, Patryk Sambak, Aleksandra Trenk, Anna Gugula, Caitlin E Singleton

Front Cell Neurosci· February 2022

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"Candidatus Dechloromonas phosphoritropha" and "Ca. D. phosphorivorans", novel polyphosphate accumulating organisms abundant in wastewater treatment systems.
Francesca Petriglieri, Caitlin Singleton, Miriam Peces, Jette F Petersen, Marta Nierychlo

ISME J· December 2021

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Diverse sediment microbiota shape methane emission temperature sensitivity in Arctic lakes.
Joanne B Emerson, Ruth K Varner, Martin Wik, Donovan H Parks, Rebecca B Neumann, Caitlin M Singleton

Nat Commun· October 2021

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Parasitic bacteria control foam formation.
Per H Nielsen, Caitlin M Singleton

Nat Microbiol· June 2021

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Low Global Diversity of Microthrix, a Troublesome Filamentous Organism in Full-Scale WWTPs.
Marta Nierychlo, Caitlin M Singleton, Francesca Petriglieri, Lisette Thomsen, Jette F Petersen

Front Microbiol· June 2021

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High Diversity and Functional Potential of Undescribed "Acidobacteriota" in Danish Wastewater Treatment Plants.
Jannie Munk Kristensen, Caitlin Singleton, Lee-Ann Clegg, Francesca Petriglieri, Per Halkjaer Nielsen

Front Microbiol· April 2021

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Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing.
Caitlin M Singleton, Francesca Petriglieri, Jannie M Kristensen, Rasmus H Kirkegaard, Thomas Y Michaelsen

Nat Commun· March 2021

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Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics.
Liping Hao, Thomas Yssing Michaelsen, Caitlin Margaret Singleton, Giulia Dottorini, Rasmus Hansen Kirkegaard

ISME J· April 2020

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The Signal and the Noise: Characteristics of Antisense RNA in Complex Microbial Communities.
Thomas Yssing Michaelsen, Jakob Brandt, Caitlin Margaret Singleton, Rasmus Hansen Kirkegaard, Johanna Wiesinger

mSystems· February 2020

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A genomic view of the reef-building coral Porites lutea and its microbial symbionts.
Steven J Robbins, Caitlin M Singleton, Cheong Xin Chan, Lauren F Messer, Aileen U Geers

Nat Microbiol· December 2019

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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species Cryosericum septentrionale gen. nov. sp. nov., Ca. C. hinesii sp. nov., Ca. C. odellii sp. nov., Ca. C. terrychapinii sp. nov.
Miguel A Martinez, Ben J Woodcroft, Julio C Ignacio Espinoza, Ahmed A Zayed, Caitlin M Singleton

Syst Appl Microbiol· January 2019

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Host-linked soil viral ecology along a permafrost thaw gradient.
Joanne B Emerson, Simon Roux, Jennifer R Brum, Benjamin Bolduc, Ben J Woodcroft, Caitlin M Singleton

Nat Microbiol· August 2018

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