Publications by authors named "Carlos Acevedo-Rocha"

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Labels as a feature: Network homophily for systematically annotating human GPCR drug-target interactions.
Frederik G Hansson, Niklas Gesmar Madsen, Lea G Hansen, Tadas Jakočiūnas, Bettina Lengger, Carlos G Acevedo-Rocha

Nat Commun· May 2025

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Protein representations: Encoding biological information for machine learning in biocatalysis.
David Harding-Larsen, Jonathan Funk, Niklas Gesmar Madsen, Hani Gharabli, Carlos G Acevedo-Rocha

Biotechnol Adv· December 2024

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Debottlenecking cytochrome P450-dependent metabolic pathways for the biosynthesis of commercial natural products.
Susanne M Germann, Maxence Holtz, Michael Krogh Jensen, Carlos G Acevedo-Rocha

Nat Prod Rep· December 2024

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Metabolic Fluxes Using Deep Learning Based on Enzyme Variations: .
Freddy Oulia, Philippe Charton, Ophélie Lo-Thong-Viramoutou, Carlos G Acevedo-Rocha, Wei Liu

Int J Mol Sci· December 2024

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Metabolic engineering of yeast for de novo production of kratom monoterpene indole alkaloids.
Maxence Holtz, Daniela Rago, Ida Nedermark, Frederik G Hansson, Beata J Lehka, Carlos G Acevedo-Rocha

Metab Eng· November 2024

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Biocatalytic pathways, cascades, cells and systems: general discussion.
Magdalena Abramiuk, Carlos Acevedo-Rocha, Abdulrahman Alogaidi, Fraser Armstrong, Amulyasai Bakshi

Faraday Discuss· September 2024

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Artificial, biomimetic and hybrid enzymes: general discussion.
Carlos Acevedo-Rocha, Amulyasai Bakshi, Uwe T Bornscheuer, Dominic J Campopiano, Janko Čivić

Faraday Discuss· September 2024

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Enzyme evolution, engineering and design: mechanism and dynamics: general discussion.
Carlos Acevedo-Rocha, Lukasz Berlicki, Uwe T Bornscheuer, Dominic J Campopiano, Pimchai Chaiyen

Faraday Discuss· September 2024

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Combining enzyme and metabolic engineering for microbial supply of therapeutic phytochemicals.
Maxence Holtz, Carlos G Acevedo-Rocha, Michael K Jensen

Curr Opin Biotechnol· June 2024

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How many Mutations are needed to Evolve the Chemical Makeup of a Synthetic Cell?
Rodrigue Yves Louis Lefèvre-Morand, Pablo Iván Nikel, Carlos G Acevedo-Rocha

Chembiochem· March 2024

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Discovery of a Biotin Synthase That Utilizes an Auxiliary 4Fe-5S Cluster for Sulfur Insertion.
Jake C Lachowicz, David Lennox-Hvenekilde, Nils Myling-Petersen, Bo Salomonsen, Gijs Verkleij, Carlos G Acevedo-Rocha

J Am Chem Soc· January 2024

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Protein engineering using mutability landscapes: Controlling site-selectivity of P450-catalyzed steroid hydroxylation.
Huili Yu, Xiaodong Zhang, Carlos G Acevedo-Rocha, Aitao Li, Manfred T Reetz

Methods Enzymol· November 2023

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Metabolic engineering of Escherichia coli for high-level production of free lipoic acid.
David Lennox-Hvenekilde, Anne P Bali, Luisa S Gronenberg, Carlos Acevedo-Rocha, Morten O A Sommer

Metab Eng· March 2023

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Learning Strategies in Protein Directed Evolution.
Xavier F Cadet, Jean Christophe Gelly, Aster van Noord, Frédéric Cadet, Carlos G Acevedo-Rocha

Methods Mol Biol· June 2022

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Correction to: Learning Strategies in Protein Directed Evolution.
Xavier F Cadet, Jean Christophe Gelly, Aster van Noord, Frédéric Cadet, Carlos G Acevedo-Rocha

Methods Mol Biol· January 2022

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Pervasive cooperative mutational effects on multiple catalytic enzyme traits emerge via long-range conformational dynamics.
Carlos G Acevedo-Rocha, Aitao Li, Lorenzo D'Amore, Sabrina Hoebenreich, Joaquin Sanchis

Nat Commun· March 2021

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One-pot biocatalytic route from cycloalkanes to α,ω-dicarboxylic acids by designed Escherichia coli consortia.
Fei Wang, Jing Zhao, Qian Li, Jun Yang, Renjie Li, Carlos G Acevedo-Rocha

Nat Commun· October 2020

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The Crucial Role of Methodology Development in Directed Evolution of Selective Enzymes.
Ge Qu, Aitao Li, Carlos G Acevedo-Rocha, Zhoutong Sun, Manfred T Reetz

Angew Chem Int Ed Engl· August 2020

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Regio- and Stereoselective Steroid Hydroxylation at C7 by Cytochrome P450 Monooxygenase Mutants.
Aitao Li, Carlos G Acevedo-Rocha, Lorenzo D'Amore, Jinfeng Chen, Yaqin Peng

Angew Chem Int Ed Engl· July 2020

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Selection for Formate Dehydrogenases with High Efficiency and Specificity toward NADP.
Liliana Calzadiaz-Ramirez, Carla Calvó-Tusell, Gabriele M M Stoffel, Steffen N Lindner, Sílvia Osuna, Carlos G Acevedo-Rocha

ACS Catal· July 2020

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Unbiased libraries in protein directed evolution.
Victor Sayous, Paul Lubrano, Yanyan Li, Carlos G Acevedo-Rocha

Biochim Biophys Acta Proteins Proteom· February 2020

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tRNA Modification Profiles and Codon-Decoding Strategies in Methanocaldococcus jannaschii.
Ningxi Yu, Manasses Jora, Beulah Solivio, Priti Thakur, Carlos G Acevedo-Rocha

J Bacteriol· May 2019

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Microbial cell factories for the sustainable manufacturing of B vitamins.
Carlos G Acevedo-Rocha, Luisa S Gronenberg, Matthias Mack, Fabian M Commichau, Hans J Genee

Curr Opin Biotechnol· April 2019

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Site-Resolved Observation of Vibrational Energy Transfer Using a Genetically Encoded Ultrafast Heater.
Tobias Baumann, Matthias Hauf, Fabian Schildhauer, Katharina B Eberl, Patrick M Durkin, Carlos G Acevedo-Rocha

Angew Chem Int Ed Engl· February 2019

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Clarifying the Difference between Iterative Saturation Mutagenesis as a Rational Guide in Directed Evolution and OmniChange as a Gene Mutagenesis Technique.
Carlos G Acevedo-Rocha, Zhoutong Sun, Manfred T Reetz

Chembiochem· December 2018

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