Publications by authors named "Chiao-Feng Lin"

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Automated Pharmacogenomic Reports for Clinical Genome Sequencing.
Barbara J Klanderman, Christopher Koch, Kalotina Machini, Shruti S Parpattedar, Shruthi Bandyadka, Chiao-Feng Lin

J Mol Diagn· March 2022

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Detecting Genetic Ancestry and Adaptation in the Taiwanese Han People.
Yun-Hua Lo, Hsueh-Chien Cheng, Chia-Ni Hsiung, Show-Ling Yang, Han-Yu Wang, Kung-Ping Lin, Mei-Ling Kang, Chiao-Feng Lin, Cheng-Jui Lin, Marie Lin

Mol Biol Evol· September 2021

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Corrigendum to: Detecting Genetic Ancestry and Adaptation in the Taiwanese Han People.
Yun-Hua Lo, Hsueh-Chien Cheng, Chia-Ni Hsiung, Show-Ling Yang, Han-Yu Wang, Kung-Ping Lin, Mei-Ling Kang, Chiao-Feng Lin, Cheng-Jui Lin, Marie Lin

Mol Biol Evol· September 2021

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Bioinformatics in Clinical Genomic Sequencing.
Matthew S Lebo, Limin Hao, Chiao-Feng Lin, Arti Singh

Clin Lab Med· June 2020

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Assessing predictions of the impact of variants on splicing in CAGI5.
Stephen M Mount, Žiga Avsec, Liran Carmel, Rita Casadio, Muhammed Hasan Çelik, Chiao-Feng Lin

Hum Mutat· September 2019

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A Rigorous Interlaboratory Examination of the Need to Confirm Next-Generation Sequencing-Detected Variants with an Orthogonal Method in Clinical Genetic Testing.
Stephen E Lincoln, Rebecca Truty, Chiao-Feng Lin, Justin M Zook, Joshua Paul

J Mol Diagn· March 2019

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Global and local ancestry in African-Americans: Implications for Alzheimer's disease risk.
Timothy J Hohman, Jessica N Cooke-Bailey, Christiane Reitz, Gyungah Jun, Adam Naj, Chiao-Feng Lin, Clinton T Baldwin, M Daniele Fallin, Lindsay A Farrer

Alzheimers Dement· March 2016

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Bioinformatics Workflow for Clinical Whole Genome Sequencing at Partners HealthCare Personalized Medicine.
Ellen A Tsai, Rimma Shakbatyan, Jason Evans, Peter Rossetti, Chet Graham, Chiao-Feng Lin

J Pers Med· February 2016

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Association of Long Runs of Homozygosity With Alzheimer Disease Among African American Individuals.
Mahdi Ghani, Christiane Reitz, Rong Cheng, Badri Narayan Vardarajan, Gyungah Jun, Chiao-Feng Lin, Clinton T Baldwin, M Daniele Fallin, Lindsay A Farrer

JAMA Neurol· November 2015

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Gene-wide analysis detects two new susceptibility genes for Alzheimer's disease.
Valentina Escott-Price, Céline Bellenguez, Li-San Wang, Seung-Hoan Choi, Denise Harold, Chiao-Feng Lin, Paul Hollingworth, Clinton Baldwin, Lina Keller, John Collinge, Caroline Graff, Lindsay A Farrer

PLoS One· October 2015

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HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements.
Yih-Chii Hwang, Chiao-Feng Lin, Otto Valladares, John Malamon, Pavel P Kuksa

Bioinformatics· April 2015

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Rarity of the Alzheimer disease-protective APP A673T variant in the United States.
Li-San Wang, Adam C Naj, Robert R Graham, Paul K Crane, Brian W Kunkle, Clinton T Baldwin, Chiao-Feng Lin, Lindsay A Farrer, Lindy E Harrell, Vivianna M Van Deerlin, Linda J Van Eldik, Clinton B Wright

JAMA Neurol· February 2015

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Effects of multiple genetic loci on age at onset in late-onset Alzheimer disease: a genome-wide association study.
Adam C Naj, Gyungah Jun, Christiane Reitz, Brian W Kunkle, William Perry, Clinton T Baldwin, Lindsay A Farrer, Lindy E Harrell, Chiao-Feng Lin, Vivianna M Van Deerlin, Linda J Van Eldik, Clinton B Wright

JAMA Neurol· November 2014

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Synaptic, transcriptional and chromatin genes disrupted in autism.
Silvia De Rubeis, Xin He, Arthur P Goldberg, Christopher S Poultney, Kaitlin Samocha, Chiao-Feng Lin, Bernie Devlin

Nature· November 2014

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DRAW+SneakPeek: analysis workflow and quality metric management for DNA-seq experiments.
Chiao-Feng Lin, Otto Valladares, D Micah Childress, Egor Klevak, Evan T Geller

Bioinformatics· October 2013

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Analyzing copy number variation using SNP array data: protocols for calling CNV and association tests.
Chiao-Feng Lin, Adam C Naj, Li-San Wang

Curr Protoc Hum Genet· October 2013

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Variants in the ATP-binding cassette transporter (ABCA7), apolipoprotein E ϵ4,and the risk of late-onset Alzheimer disease in African Americans.
Christiane Reitz, Gyungah Jun, Adam Naj, Ruchita Rajbhandary, Badri Narayan Vardarajan, Chiao-Feng Lin, Clinton T Baldwin, M Daniele Fallin, Lindsay A Farrer

JAMA· April 2013

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Rare complete knockouts in humans: population distribution and significant role in autism spectrum disorders.
Elaine T Lim, Soumya Raychaudhuri, Stephan J Sanders, Christine Stevens, Aniko Sabo, Chiao-Feng Lin, Bernie Devlin

Neuron· January 2013

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U12-type spliceosomal introns of Insecta.
Jessin Janice, Amit Pande, January Weiner, Chiao-Feng Lin, Wojciech Makałowski

Int J Biol Sci· July 2012

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Patterns and rates of exonic de novo mutations in autism spectrum disorders.
Benjamin M Neale, Yan Kou, Li Liu, Avi Ma'ayan, Kaitlin E Samocha, Chiao-Feng Lin, Ryan Poplin, Catalina Betancur, Bernie Devlin

Nature· April 2012

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Evolutionary dynamics of U12-type spliceosomal introns.
Chiao-Feng Lin, Stephen M Mount, Artur Jarmołowski, Wojciech Makałowski

BMC Evol Biol· February 2010

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Evolution of genes and genomes on the Drosophila phylogeny.

Nature· November 2007

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Birth and death of gene overlaps in vertebrates.
Izabela Makałowska, Chiao-Feng Lin, Krisitina Hernandez

BMC Evol Biol· October 2007

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Spliceosomal small nuclear RNA genes in 11 insect genomes.
Stephen M Mount, Valer Gotea, Chiao-Feng Lin, Kristina Hernandez, Wojciech Makalowski

RNA· January 2007

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Molecular evolution in the Drosophila melanogaster species subgroup: frequent parameter fluctuations on the timescale of molecular divergence.
Hiroshi Akashi, Wen-Ya Ko, Shengfu Piao, Anoop John, Piyush Goel, Chiao-Feng Lin

Genetics· March 2006

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